RNA–Protein interactions for RNA: ENST00000260197.11

SORL1-201, Transcript of sortilin related receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORL1, Length 10,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-201ENST00000260197 SNTNA6NMZ2 147 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 TM9SF1O15321 606 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 ATP9BO43861 1147 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 GRAP2O75791 330 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 PID1Q7Z2X4 250 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 TTC30AQ86WT1 665 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 UBE2OQ9C0C9 1292 aaKnown RBP12.12□□□□□ -0.47
SORL1-201ENST00000260197 MTMR4Q9NYA4 1195 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 UNC13CQ8NB66 2214 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 CYP27B1O15528 508 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 ATP6V1B1P15313 513 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 KHDRBS2Q5VWX1 349 aaKnown RBP12.12□□□□□ -0.47
SORL1-201ENST00000260197 NEDD1Q8NHV4 660 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 TEX13BQ9BXU2 312 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 NIF3L1Q9GZT8 377 aa12.12□□□□□ -0.47
SORL1-201ENST00000260197 CEP250Q9BV73 2442 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 SLC2A3P11169 496 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 CALB2P22676 271 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 GTF2H1P32780 548 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 POU4F1Q01851 419 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 CCDC126Q96EE4 140 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 CNTNAP5Q8WYK1 1306 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 CABIN1Q9Y6J0 2220 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 HIST1H2AGP0C0S8 130 aaPredicted RBP12.11□□□□□ -0.47
SORL1-201ENST00000260197 HIST1H2ADP20671 130 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 C4BPBP20851 252 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 USP10Q14694 798 aaKnown RBP12.11□□□□□ -0.47
SORL1-201ENST00000260197 HIST1H2AHQ96KK5 128 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 HIST1H2AJQ99878 128 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 H2AFJQ9BTM1 129 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 PABPC3Q9H361 631 aaKnown RBP12.11□□□□□ -0.47
SORL1-201ENST00000260197 TRPC7Q9HCX4 862 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 GRID1Q9ULK0 1009 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 F5H6K3 240 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 XPO1O14980 1071 aaKnown RBP12.11□□□□□ -0.47
SORL1-201ENST00000260197 NMT1P30419 496 aaKnown RBP12.11□□□□□ -0.47
SORL1-201ENST00000260197 KLK7P49862 253 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 NUP107P57740 925 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 KLRC3Q07444 240 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 LMBRD2Q68DH5 695 aaPredicted RBP12.11□□□□□ -0.47
SORL1-201ENST00000260197 ADRM1Q16186 407 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 SHCBP1Q8NEM2 672 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 ANKS1AQ92625 1134 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 HPS3Q969F9 1004 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 ZNF839A8K0R7 811 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 RNF103O00237 685 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 MOCS2O96007 188 aaPredicted RBP12.11□□□□□ -0.47
SORL1-201ENST00000260197 PSMC3P17980 439 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 WDR93Q6P2C0 686 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 SMARCAD1Q9H4L7 1026 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 RGL1Q9NZL6 768 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 PIN4Q9Y237 131 aaKnown RBP12.11□□□□□ -0.47
SORL1-201ENST00000260197 EVPLLA8MZ36 301 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 PDGFRAP16234 1089 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 NCKAP1LP55160 1127 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 ATG9AQ7Z3C6 839 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 SCUBE1Q8IWY4 988 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 STKLD1Q8NE28 680 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 ZIM3Q96PE6 472 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 RAB14P61106 215 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 PRKCEQ02156 737 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 NFX1Q12986 1120 aaKnown RBP12.11□□□□□ -0.47
SORL1-201ENST00000260197 C16orf86Q6ZW13 317 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 KDELC2Q7Z4H8 507 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 AGAP3Q96P47 875 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
SORL1-201ENST00000260197 MYMKA6NI61 221 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 UBTFL6P0CB48 400 aaPredicted RBP12.11□□□□□ -0.47
SORL1-201ENST00000260197 XRRA1Q6P2D8 792 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 PABPC5Q96DU9 382 aaKnown RBP12.11□□□□□ -0.47
SORL1-201ENST00000260197 MAML3Q96JK9 1138 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 MOSPD1Q9UJG1 213 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 SLC39A10Q9ULF5 831 aa12.11□□□□□ -0.47
SORL1-201ENST00000260197 NPEPPSP55786 919 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 C12orf60Q5U649 245 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 HPDLQ96IR7 371 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 ZSWIM1Q9BR11 485 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 CD209Q9NNX6 404 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 B2RBV5 119 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 NQO1P15559 274 aaKnown RBP12.1□□□□□ -0.47
SORL1-201ENST00000260197 SLC29A2Q14542 456 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 NCF4Q15080 339 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 UGT3A1Q6NUS8 523 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 NOTUMQ6P988 496 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 MYCBPAPQ8TBZ2 947 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 SV2CQ496J9 727 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 DCAF6Q58WW2 860 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 DDX42Q86XP3 938 aaKnown RBP eCLIP12.1□□□□□ -0.47
SORL1-201ENST00000260197 FHOD1Q9Y613 1164 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 LDHDQ86WU2 507 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 RBM46Q8TBY0 533 aaKnown RBP12.1□□□□□ -0.47
SORL1-201ENST00000260197 OPTNQ96CV9 577 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 TCN1P20061 433 aaPredicted RBP12.1□□□□□ -0.47
SORL1-201ENST00000260197 PCSK7Q16549 785 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 SLC7A14Q8TBB6 771 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 PNKPQ96T60 521 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 FAM153AQ9UHL3 310 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 SDR42E2A6NKP2 422 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 DGKIO75912 1065 aa12.1□□□□□ -0.47
SORL1-201ENST00000260197 FXR1P51114 621 aaKnown RBP eCLIP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms