RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 TCF20Q9UGU0 1960 aaKnown RBP17.87■□□□□ 0.45
SDCBP-201ENST00000260130 P4HA2O15460 535 aa17.87■□□□□ 0.45
SDCBP-201ENST00000260130 AFPP02771 609 aaKnown RBP17.87■□□□□ 0.45
SDCBP-201ENST00000260130 PLD1Q13393 1074 aa17.87■□□□□ 0.45
SDCBP-201ENST00000260130 MAPRE1Q15691 268 aaKnown RBP17.87■□□□□ 0.45
SDCBP-201ENST00000260130 MGAT5BQ3V5L5 792 aa17.87■□□□□ 0.45
SDCBP-201ENST00000260130 FAM114A1Q8IWE2 563 aa17.87■□□□□ 0.45
SDCBP-201ENST00000260130 ELMOD1Q8N336 334 aa17.87■□□□□ 0.45
SDCBP-201ENST00000260130 COL25A1Q9BXS0 654 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-201ENST00000260130 HCFC1R1Q9NWW0 138 aa17.87■□□□□ 0.45
SDCBP-201ENST00000260130 CLUHO75153 1309 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 C19orf67A6NJJ6 358 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 HAPLN1P10915 354 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-201ENST00000260130 SKILP12757 684 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 PTPN2P17706 415 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 PTPN1P18031 435 aaKnown RBP17.86■□□□□ 0.45
SDCBP-201ENST00000260130 CCDC142Q17RM4 750 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 SPATA2LQ8IUW3 424 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-201ENST00000260130 GJD3Q8N144 294 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 MYCBPAPQ8TBZ2 947 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 TATDN2Q93075 761 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 ZNF512Q96ME7 567 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-201ENST00000260130 SEPT5Q99719 369 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-201ENST00000260130 DPEP3Q9H4B8 488 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 CEP72Q9P209 647 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 IMPACTQ9P2X3 320 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 NR2E1Q9Y466 385 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 MUC3AQ02505 3323 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 LOC730098B7Z3J9 87 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 SOAT2O75908 522 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 NTHL1P78549 312 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 CFAP221Q4G0U5 840 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 IQCEQ6IPM2 695 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 C4orf50Q6ZRC1 276 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 FUBP3Q96I24 572 aaKnown RBP eCLIP17.86■□□□□ 0.453e-11■■■■■ 48.5
SDCBP-201ENST00000260130 ABCB6Q9NP58 842 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 MAGEC2Q9UBF1 373 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-201ENST00000260130 USTQ9Y2C2 406 aa17.86■□□□□ 0.45
SDCBP-201ENST00000260130 SP100P23497 879 aaPredicted RBP17.85■□□□□ 0.45
SDCBP-201ENST00000260130 SSTR3P32745 418 aaPredicted RBP17.85■□□□□ 0.45
SDCBP-201ENST00000260130 MTIF2P46199 727 aaKnown RBP17.85■□□□□ 0.45
SDCBP-201ENST00000260130 EPHB3P54753 998 aa17.85■□□□□ 0.45
SDCBP-201ENST00000260130 TPM4P67936 248 aa17.85■□□□□ 0.45
SDCBP-201ENST00000260130 PABPC1LQ4VXU2 614 aaKnown RBP17.85■□□□□ 0.45
SDCBP-201ENST00000260130 UNC93AQ86WB7 457 aa17.85■□□□□ 0.45
SDCBP-201ENST00000260130 B3GALNT2Q8NCR0 500 aa17.85■□□□□ 0.45
SDCBP-201ENST00000260130 TNIP3Q96KP6 325 aa17.85■□□□□ 0.45
SDCBP-201ENST00000260130 KCND1Q9NSA2 647 aa17.85■□□□□ 0.45
SDCBP-201ENST00000260130 NFE2L3Q9Y4A8 694 aa17.85■□□□□ 0.45
SDCBP-201ENST00000260130 CYP2F1P24903 491 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 NDST1P52848 882 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 INCA1Q0VD86 236 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 HSP90AA4PQ58FG1 418 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 MDH1BQ5I0G3 518 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 OTOP3Q7RTS5 596 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 MYLPFQ96A32 169 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 PCED1BQ96HM7 432 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 LPIN3Q9BQK8 851 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 CORO1BQ9BR76 489 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 CD320Q9NPF0 282 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 SAMSN1Q9NSI8 373 aaKnown RBP17.84■□□□□ 0.45
SDCBP-201ENST00000260130 ASB3Q9Y575 518 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 RHOP08100 348 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 FSHRP23945 695 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 CYP27A1Q02318 531 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 LMO3Q8TAP4 145 aa17.84■□□□□ 0.45
SDCBP-201ENST00000260130 ACSF2Q96CM8 615 aaPredicted RBP17.84■□□□□ 0.45
SDCBP-201ENST00000260130 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.84■□□□□ 0.45
SDCBP-201ENST00000260130 C2CD4DB7Z1M9 353 aa17.83■□□□□ 0.45
SDCBP-201ENST00000260130 KIF2AO00139 706 aaPredicted RBP17.83■□□□□ 0.45
SDCBP-201ENST00000260130 ATF6P18850 670 aa17.83■□□□□ 0.45
SDCBP-201ENST00000260130 CD58P19256 250 aa17.83■□□□□ 0.45
SDCBP-201ENST00000260130 CCZ1BP86790 482 aa17.83■□□□□ 0.45
SDCBP-201ENST00000260130 CCZ1P86791 482 aaPredicted RBP17.83■□□□□ 0.45
SDCBP-201ENST00000260130 ACOT1Q86TX2 421 aa17.83■□□□□ 0.45
SDCBP-201ENST00000260130 CRYBG2Q8N1P7 616 aa17.83■□□□□ 0.45
SDCBP-201ENST00000260130 EHBP1Q8NDI1 1231 aa17.83■□□□□ 0.45
SDCBP-201ENST00000260130 AVENQ9NQS1 362 aaPredicted RBP17.83■□□□□ 0.45
SDCBP-201ENST00000260130 HMGXB4Q9UGU5 601 aa17.83■□□□□ 0.45
SDCBP-201ENST00000260130 MAGEA11P43364 429 aa17.83■□□□□ 0.44
SDCBP-201ENST00000260130 RPL10AP62906 217 aaKnown RBP17.83■□□□□ 0.44
SDCBP-201ENST00000260130 NYAP1Q6ZVC0 841 aa17.83■□□□□ 0.44
SDCBP-201ENST00000260130 DNAJB7Q7Z6W7 309 aaPredicted RBP17.83■□□□□ 0.44
SDCBP-201ENST00000260130 ITIH5Q86UX2 942 aa17.83■□□□□ 0.44
SDCBP-201ENST00000260130 PLCD3Q8N3E9 789 aa17.83■□□□□ 0.44
SDCBP-201ENST00000260130 TTC39CQ8N584 583 aa17.83■□□□□ 0.44
SDCBP-201ENST00000260130 TDRD5Q8NAT2 981 aaKnown RBP17.83■□□□□ 0.44
SDCBP-201ENST00000260130 PSMG2Q969U7 264 aa17.83■□□□□ 0.44
SDCBP-201ENST00000260130 FAM124BQ9H5Z6 455 aaPredicted RBP17.83■□□□□ 0.44
SDCBP-201ENST00000260130 C2orf16Q68DN1 1984 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 KCNJ18B7U540 433 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 CILPO75339 1184 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 BDNFP23560 247 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 GBP2P32456 591 aaPredicted RBP17.82■□□□□ 0.44
SDCBP-201ENST00000260130 CUL2Q13617 745 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 KCNJ12Q14500 433 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 ARID5BQ14865 1188 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 VEPH1Q14D04 833 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 MAN2A1Q16706 1144 aa17.82■□□□□ 0.44
SDCBP-201ENST00000260130 DDR2Q16832 855 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms