RNA–Protein interactions for RNA: ENST00000259239.7

IMP4-201, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IMP4, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-201ENST00000259239 HESX1Q9UBX0 185 aa18.85■□□□□ 0.61
IMP4-201ENST00000259239 TJP2Q9UDY2 1190 aa18.85■□□□□ 0.61
IMP4-201ENST00000259239 CDH9Q9ULB4 789 aa18.85■□□□□ 0.61
IMP4-201ENST00000259239 ZMYND8Q9ULU4 1186 aaPredicted RBP18.85■□□□□ 0.61
IMP4-201ENST00000259239 PCDHGC5Q9Y5F6 944 aa18.85■□□□□ 0.61
IMP4-201ENST00000259239 CALB1P05937 261 aa18.84■□□□□ 0.61
IMP4-201ENST00000259239 YWHAHQ04917 246 aaPredicted RBP18.84■□□□□ 0.61
IMP4-201ENST00000259239 PDCLQ13371 301 aa18.84■□□□□ 0.61
IMP4-201ENST00000259239 IFI16Q16666 785 aaKnown RBP18.84■□□□□ 0.61
IMP4-201ENST00000259239 CYP4A22Q5TCH4 519 aa18.84■□□□□ 0.61
IMP4-201ENST00000259239 LIN9Q5TKA1 542 aa18.84■□□□□ 0.61
IMP4-201ENST00000259239 BCL7CQ8WUZ0 217 aaPredicted RBP18.84■□□□□ 0.61
IMP4-201ENST00000259239 GPR62Q9BZJ7 368 aa18.84■□□□□ 0.61
IMP4-201ENST00000259239 GOLPH3Q9H4A6 298 aa18.84■□□□□ 0.61
IMP4-201ENST00000259239 AVENQ9NQS1 362 aaPredicted RBP18.84■□□□□ 0.61
IMP4-201ENST00000259239 SF3B1O75533 1304 aaKnown RBP eCLIP18.83■□□□□ 0.618e-6■■■■■ 107
IMP4-201ENST00000259239 MYBPHLA2RUH7 354 aa18.83■□□□□ 0.61
IMP4-201ENST00000259239 TULP2O00295 520 aa18.83■□□□□ 0.61
IMP4-201ENST00000259239 CLDN5O00501 218 aa18.83■□□□□ 0.61
IMP4-201ENST00000259239 ENC1O14682 589 aa18.83■□□□□ 0.61
IMP4-201ENST00000259239 TMEM240Q5SV17 173 aa18.83■□□□□ 0.61
IMP4-201ENST00000259239 FUKQ8N0W3 1084 aa18.83■□□□□ 0.61
IMP4-201ENST00000259239 OR10T2Q8NGX3 314 aa18.83■□□□□ 0.61
IMP4-201ENST00000259239 ZNF564Q8TBZ8 553 aaPredicted RBP18.83■□□□□ 0.61
IMP4-201ENST00000259239 NAPGQ99747 312 aaPredicted RBP18.83■□□□□ 0.61
IMP4-201ENST00000259239 ACBD6Q9BR61 282 aa18.83■□□□□ 0.61
IMP4-201ENST00000259239 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.83■□□□□ 0.612e-6■■■□□ 15.5
IMP4-201ENST00000259239 CTAGE9A4FU28 777 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 ALDH7A1P49419 539 aaKnown RBP18.83■□□□□ 0.6
IMP4-201ENST00000259239 BCAT1P54687 386 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 PDE4CQ08493 712 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 BTG3Q14201 252 aaPredicted RBP18.83■□□□□ 0.6
IMP4-201ENST00000259239 TCEAL1Q15170 157 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 INTS6LQ5JSJ4 861 aaKnown RBP18.83■□□□□ 0.6
IMP4-201ENST00000259239 SPOUT1Q5T280 376 aaKnown RBP18.83■□□□□ 0.6
IMP4-201ENST00000259239 FAM171A1Q5VUB5 890 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 FUT10Q6P4F1 479 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 PSRC1Q6PGN9 363 aaPredicted RBP18.83■□□□□ 0.6
IMP4-201ENST00000259239 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.83■□□□□ 0.6
IMP4-201ENST00000259239 THEM5Q8N1Q8 247 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 LRRC57Q8N9N7 239 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 ANKRD52Q8NB46 1076 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 ABHD8Q96I13 439 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 B3GALT6Q96L58 329 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 TMEM209Q96SK2 561 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 HNRNPABQ99729 332 aaKnown RBP18.83■□□□□ 0.6
IMP4-201ENST00000259239 MED10Q9BTT4 135 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 ST7Q9NRC1 585 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 CXXC1Q9P0U4 656 aaPredicted RBP18.83■□□□□ 0.6
IMP4-201ENST00000259239 UVRAGQ9P2Y5 699 aa18.83■□□□□ 0.6
IMP4-201ENST00000259239 CEP290O15078 2479 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 SYN3O14994 580 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 BUB1BO60566 1050 aaPredicted RBP18.82■□□□□ 0.6
IMP4-201ENST00000259239 MTA2O94776 668 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 FTCDO95954 541 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 ERBB2P04626 1255 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 RGS7P49802 495 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 HADHBP55084 474 aaKnown RBP18.82■□□□□ 0.6
IMP4-201ENST00000259239 BST2Q10589 180 aaKnown RBP18.82■□□□□ 0.6
IMP4-201ENST00000259239 COL13A1Q5TAT6 717 aaPredicted RBP18.82■□□□□ 0.6
IMP4-201ENST00000259239 PAQR9Q6ZVX9 377 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 CEP57Q86XR8 500 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 CMTR2Q8IYT2 770 aaKnown RBP18.82■□□□□ 0.6
IMP4-201ENST00000259239 MYCBPAPQ8TBZ2 947 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 PCED1BQ96HM7 432 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 YME1L1Q96TA2 773 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 B3GNT5Q9BYG0 378 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 SYNCQ9H7C4 482 aa18.82■□□□□ 0.6
IMP4-201ENST00000259239 MRPL42Q9Y6G3 142 aaKnown RBP18.82■□□□□ 0.6
IMP4-201ENST00000259239 PATJQ8NI35 1801 aa18.81■□□□□ 0.6
IMP4-201ENST00000259239 PIK3R2O00459 728 aa18.81■□□□□ 0.6
IMP4-201ENST00000259239 GJB6O95452 261 aa18.81■□□□□ 0.6
IMP4-201ENST00000259239 ATP1A1P05023 1023 aaKnown RBP18.81■□□□□ 0.6
IMP4-201ENST00000259239 SETSIPP0DME0 302 aa18.81■□□□□ 0.6
IMP4-201ENST00000259239 PTPROQ16827 1216 aa18.81■□□□□ 0.6
IMP4-201ENST00000259239 VARS2Q5ST30 1063 aaKnown RBP18.81■□□□□ 0.6
IMP4-201ENST00000259239 PLEKHA7Q6IQ23 1121 aa18.81■□□□□ 0.6
IMP4-201ENST00000259239 PMF1Q6P1K2 205 aa18.81■□□□□ 0.6
IMP4-201ENST00000259239 DAAM2Q86T65 1068 aa18.81■□□□□ 0.6
IMP4-201ENST00000259239 MSANTD4Q8NCY6 345 aa18.81■□□□□ 0.6
IMP4-201ENST00000259239 SLC35F5Q8WV83 523 aa18.81■□□□□ 0.6
IMP4-201ENST00000259239 BTBD6Q96KE9 485 aa18.81■□□□□ 0.6
IMP4-201ENST00000259239 OAZ2O95190 189 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 TSPY1Q01534 308 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 MAMLD1Q13495 774 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 KCNT2Q6UVM3 1135 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 FAM35AQ86V20 835 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 XYLT1Q86Y38 959 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 IPO4Q8TEX9 1081 aaKnown RBP18.8■□□□□ 0.6
IMP4-201ENST00000259239 DPF3Q92784 378 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 MYLPFQ96A32 169 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 C18orf8Q96DM3 657 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 PKMYT1Q99640 499 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 TRIM7Q9C029 511 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 KRT82Q9NSB4 513 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 TMLHEQ9NVH6 421 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 STRIP2Q9ULQ0 834 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 JRKLQ9Y4A0 524 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 SCINQ9Y6U3 715 aa18.8■□□□□ 0.6
IMP4-201ENST00000259239 TCRBV5S1A1TA0A578 114 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms