RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 CACNA2D1P54289 1103 aa6.16□□□□□ -1.42
TRA2B-201ENST00000259043 KRTAP10-9P60411 292 aa6.16□□□□□ -1.42
TRA2B-201ENST00000259043 PTPRRQ15256 657 aa6.16□□□□□ -1.42
TRA2B-201ENST00000259043 MYCBPAPQ8TBZ2 947 aa6.16□□□□□ -1.42
TRA2B-201ENST00000259043 NELL1Q92832 810 aa6.16□□□□□ -1.42
TRA2B-201ENST00000259043 FAM167AQ96KS9 214 aa6.16□□□□□ -1.42
TRA2B-201ENST00000259043 LRFN3Q9BTN0 628 aa6.16□□□□□ -1.42
TRA2B-201ENST00000259043 DUSP26Q9BV47 211 aa6.16□□□□□ -1.42
TRA2B-201ENST00000259043 RTFDC1Q9BY42 306 aaPredicted RBP6.16□□□□□ -1.42
TRA2B-201ENST00000259043 TINAGL1Q9GZM7 467 aaPredicted RBP6.16□□□□□ -1.42
TRA2B-201ENST00000259043 SMOC2Q9H3U7 446 aa6.16□□□□□ -1.42
TRA2B-201ENST00000259043 SLAMF7Q9NQ25 335 aa6.16□□□□□ -1.42
TRA2B-201ENST00000259043 SEMA4GQ9NTN9 838 aa6.16□□□□□ -1.42
TRA2B-201ENST00000259043 FEZ2Q9UHY8 353 aaPredicted RBP6.16□□□□□ -1.42
TRA2B-201ENST00000259043 MIA2Q96PC5 1412 aa6.16□□□□□ -1.42
TRA2B-201ENST00000259043 CCDC18Q5T9S5 1454 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 MBD5Q9P267 1494 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 KDM5DQ9BY66 1539 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 VWC2LB2RUY7 222 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 AHSGP02765 367 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 S100BP04271 92 aaPredicted RBP6.15□□□□□ -1.42
TRA2B-201ENST00000259043 ALDH2P05091 517 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 ELFN1P0C7U0 828 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 MAPK10P53779 464 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 PIN1Q13526 163 aaPredicted RBP6.15□□□□□ -1.42
TRA2B-201ENST00000259043 PLS1Q14651 629 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 EPHA10Q5JZY3 1008 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 TAF2Q6P1X5 1199 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 SLC30A10Q6XR72 485 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 BHLHA9Q7RTU4 235 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 PSD4Q8NDX1 1056 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 TNPO1Q92973 898 aaKnown RBP6.15□□□□□ -1.42
TRA2B-201ENST00000259043 CNPPD1Q9BV87 410 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 KMT5AQ9NQR1 393 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 PNPOQ9NVS9 261 aa6.15□□□□□ -1.42
TRA2B-201ENST00000259043 FAM135BQ49AJ0 1406 aa6.15□□□□□ -1.43
TRA2B-201ENST00000259043 CASKIN1Q8WXD9 1431 aa6.15□□□□□ -1.43
TRA2B-201ENST00000259043 NLRP1Q9C000 1473 aa6.15□□□□□ -1.43
TRA2B-201ENST00000259043 ADM5C9JUS6 153 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 AKAP10O43572 662 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 KIF20AO95235 890 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 BOP1Q14137 746 aaKnown RBP6.14□□□□□ -1.43
TRA2B-201ENST00000259043 TXNRD1Q16881 649 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 NBPF8Q3BBV2 869 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 PLEKHG6Q3KR16 790 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 PREPLQ4J6C6 727 aaPredicted RBP6.14□□□□□ -1.43
TRA2B-201ENST00000259043 EMC10Q5UCC4 262 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 USP37Q86T82 979 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 PEG10Q86TG7 708 aaKnown RBP6.14□□□□□ -1.43
TRA2B-201ENST00000259043 FAM109AQ8N4B1 249 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 BOLLQ8N9W6 283 aaKnown RBP6.14□□□□□ -1.43
TRA2B-201ENST00000259043 PLBD2Q8NHP8 589 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 TFAP2BQ92481 460 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 PGBD1Q96JS3 809 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 OSBPL9Q96SU4 736 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 RSAD1Q9HA92 442 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 PCDHA1Q9Y5I3 950 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 NR2E3Q9Y5X4 410 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 ZNF644Q9H582 1327 aaPredicted RBP6.14□□□□□ -1.43
TRA2B-201ENST00000259043 DHX29Q7Z478 1369 aaKnown RBP6.14□□□□□ -1.43
TRA2B-201ENST00000259043 ROBO1Q9Y6N7 1651 aa6.14□□□□□ -1.43
TRA2B-201ENST00000259043 IGLV2-14P01704 120 aa6.13□□□□□ -1.43
TRA2B-201ENST00000259043 NDUFV1P49821 464 aa6.13□□□□□ -1.43
TRA2B-201ENST00000259043 ZNF267Q14586 743 aaPredicted RBP6.13□□□□□ -1.43
TRA2B-201ENST00000259043 KAZNQ674X7 775 aa6.13□□□□□ -1.43
TRA2B-201ENST00000259043 B3GNT9Q6UX72 402 aa6.13□□□□□ -1.43
TRA2B-201ENST00000259043 SH2D3CQ8N5H7 860 aa6.13□□□□□ -1.43
TRA2B-201ENST00000259043 FBXL20Q96IG2 436 aa6.13□□□□□ -1.43
TRA2B-201ENST00000259043 MAP3K14Q99558 947 aa6.13□□□□□ -1.43
TRA2B-201ENST00000259043 CGRRF1Q99675 332 aa6.13□□□□□ -1.43
TRA2B-201ENST00000259043 KLK15Q9H2R5 256 aa6.13□□□□□ -1.43
TRA2B-201ENST00000259043 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.13□□□□□ -1.43
TRA2B-201ENST00000259043 KLHL42Q9P2K6 505 aa6.13□□□□□ -1.43
TRA2B-201ENST00000259043 PNMA8BQ9ULN7 279 aaPredicted RBP6.13□□□□□ -1.43
TRA2B-201ENST00000259043 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.13□□□□□ -1.43
TRA2B-201ENST00000259043 NCOA2Q15596 1464 aa6.13□□□□□ -1.43
TRA2B-201ENST00000259043 PLEKHH2Q8IVE3 1493 aa6.13□□□□□ -1.43
TRA2B-201ENST00000259043 A0A0B4J269 797 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 E2F8A0AVK6 867 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 RTEL1-TNFRSF6BF6WH68 1400 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 DNAJB5O75953 348 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 HDCP19113 662 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 GRIA3P42263 894 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 RAB27AP51159 221 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 ELLP55199 621 aaPredicted RBP6.12□□□□□ -1.43
TRA2B-201ENST00000259043 NXPH1P58417 271 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 EXOSC9Q06265 439 aaKnown RBP6.12□□□□□ -1.43
TRA2B-201ENST00000259043 MAP3K1Q13233 1512 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 TUBB3Q13509 450 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 NOL8Q76FK4 1167 aaKnown RBP6.12□□□□□ -1.43
TRA2B-201ENST00000259043 UBR1Q8IWV7 1749 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 TOR1AIP2Q8NFQ8 470 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 DIS3LQ8TF46 1054 aaKnown RBP6.12□□□□□ -1.43
TRA2B-201ENST00000259043 C1GALT1C1Q96EU7 318 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 SLC35A4Q96G79 324 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 ADGRA2Q96PE1 1338 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 CAMKK2Q96RR4 588 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 AMBRA1Q9C0C7 1298 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 SIK2Q9H0K1 926 aa6.12□□□□□ -1.43
TRA2B-201ENST00000259043 CDH19Q9H159 772 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms