RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 USTQ9Y2C2 406 aa29.22■■■□□ 2.27
CCM2-201ENST00000258781 RPS6KA5O75582 802 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 FNTAP49354 379 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 PSMC1P62191 440 aaKnown RBP29.21■■■□□ 2.27
CCM2-201ENST00000258781 PDCLQ13371 301 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 FBXO47Q5MNV8 452 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 ZNF618Q5T7W0 954 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 XYLT1Q86Y38 959 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 SYNCQ9H7C4 482 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 CHST12Q9NRB3 414 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 H3BQF6 201 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 ECHS1P30084 290 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 PTGIRP43119 386 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 OGDHQ02218 1023 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 JAMLQ86YT9 394 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 FNIP1Q8TF40 1166 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 LRRC19Q9H756 370 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 GDAP2Q9NXN4 497 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 ST3GAL5Q9UNP4 418 aa29.21■■■□□ 2.27
CCM2-201ENST00000258781 HLTFQ14527 1009 aaKnown RBP eCLIP29.2■■■□□ 2.26
CCM2-201ENST00000258781 DAB2IPQ5VWQ8 1189 aa29.2■■■□□ 2.26
CCM2-201ENST00000258781 FAM126BQ8IXS8 530 aa29.2■■■□□ 2.26
CCM2-201ENST00000258781 ERP44Q9BS26 406 aa29.2■■■□□ 2.26
CCM2-201ENST00000258781 MIS12Q9H081 205 aa29.2■■■□□ 2.26
CCM2-201ENST00000258781 ST7Q9NRC1 585 aa29.2■■■□□ 2.26
CCM2-201ENST00000258781 ERBB2P04626 1255 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 FAM153BP0C7A2 387 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 KRT3P12035 628 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 CKBP12277 381 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 COILP38432 576 aaPredicted RBP29.19■■■□□ 2.26
CCM2-201ENST00000258781 PKN2Q16513 984 aaKnown RBP29.19■■■□□ 2.26
CCM2-201ENST00000258781 FAM153CQ494X1 144 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 HSP90B2PQ58FF3 399 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 DUPD1Q68J44 220 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 CCDC137Q6PK04 289 aaKnown RBP29.19■■■□□ 2.26
CCM2-201ENST00000258781 MCRS1Q96EZ8 462 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 TRIM51Q9BSJ1 452 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 FAM153AQ9UHL3 310 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 TSPAN16Q9UKR8 245 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 GOLGA8SH3BPF8 625 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 DAPK3O43293 454 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 GHRP10912 638 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 SSR1P43307 286 aaKnown RBP29.19■■■□□ 2.26
CCM2-201ENST00000258781 DRG2P55039 364 aaKnown RBP29.19■■■□□ 2.26
CCM2-201ENST00000258781 NFX1Q12986 1120 aaKnown RBP29.19■■■□□ 2.26
CCM2-201ENST00000258781 FAM26DQ5JW98 314 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 TTC27Q6P3X3 843 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 TRAF7Q6Q0C0 670 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 IPO4Q8TEX9 1081 aaKnown RBP29.19■■■□□ 2.26
CCM2-201ENST00000258781 TJP2Q9UDY2 1190 aa29.19■■■□□ 2.26
CCM2-201ENST00000258781 PODXLO00592 558 aa29.18■■■□□ 2.26
CCM2-201ENST00000258781 TAF6P49848 677 aa29.18■■■□□ 2.26
CCM2-201ENST00000258781 GABPB1Q06547 395 aaPredicted RBP29.18■■■□□ 2.26
CCM2-201ENST00000258781 SOWAHAQ2M3V2 549 aa29.18■■■□□ 2.26
CCM2-201ENST00000258781 SV2CQ496J9 727 aa29.18■■■□□ 2.26
CCM2-201ENST00000258781 DDX42Q86XP3 938 aaKnown RBP eCLIP29.18■■■□□ 2.26
CCM2-201ENST00000258781 HACE1Q8IYU2 909 aa29.18■■■□□ 2.26
CCM2-201ENST00000258781 FAM71BQ8TC56 605 aa29.18■■■□□ 2.26
CCM2-201ENST00000258781 KPNA7A9QM74 516 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 F8VP50 259 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 SETSIPP0DME0 302 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 RFC1P35251 1148 aaPredicted RBP29.17■■■□□ 2.26
CCM2-201ENST00000258781 CETN2P41208 172 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 LPIN1Q14693 890 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 ALS2CLQ60I27 953 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 RBM41Q96IZ5 413 aaKnown RBP29.17■■■□□ 2.26
CCM2-201ENST00000258781 GOLGA6BA6NDN3 693 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 LRPAP1P30533 357 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 CD52P31358 61 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 SOX4Q06945 474 aaPredicted RBP29.17■■■□□ 2.26
CCM2-201ENST00000258781 GOLGA7BQ2TAP0 167 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 DPH6Q7L8W6 267 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 LIMS2Q7Z4I7 341 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 CCDC50Q8IVM0 306 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 RCOR2Q8IZ40 523 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 TSEN2Q8NCE0 465 aaKnown RBP29.17■■■□□ 2.26
CCM2-201ENST00000258781 UBA3Q8TBC4 463 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 DIS3LQ8TF46 1054 aaKnown RBP29.17■■■□□ 2.26
CCM2-201ENST00000258781 SLCO2A1Q92959 643 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 DNAI2Q9GZS0 605 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 RNF19AQ9NV58 838 aa29.17■■■□□ 2.26
CCM2-201ENST00000258781 CAND2O75155 1236 aa29.16■■■□□ 2.26
CCM2-201ENST00000258781 ATN1P54259 1190 aaPredicted RBP29.16■■■□□ 2.26
CCM2-201ENST00000258781 ACOT1Q86TX2 421 aa29.16■■■□□ 2.26
CCM2-201ENST00000258781 PPP1R10Q96QC0 940 aaKnown RBP29.16■■■□□ 2.26
CCM2-201ENST00000258781 HOMER3Q9NSC5 361 aa29.16■■■□□ 2.26
CCM2-201ENST00000258781 FAM105AQ9NUU6 356 aa29.16■■■□□ 2.26
CCM2-201ENST00000258781 DDX56Q9NY93 547 aaKnown RBP29.16■■■□□ 2.26
CCM2-201ENST00000258781 PADI3Q9ULW8 664 aa29.16■■■□□ 2.26
CCM2-201ENST00000258781 NME7Q9Y5B8 376 aa29.16■■■□□ 2.26
CCM2-201ENST00000258781 GPR182O15218 404 aa29.15■■■□□ 2.26
CCM2-201ENST00000258781 PSMA2P25787 234 aa29.15■■■□□ 2.26
CCM2-201ENST00000258781 GBP1P32455 592 aa29.15■■■□□ 2.26
CCM2-201ENST00000258781 HSPA9P38646 679 aaKnown RBP29.15■■■□□ 2.26
CCM2-201ENST00000258781 KLF1Q13351 362 aaPredicted RBP29.15■■■□□ 2.26
CCM2-201ENST00000258781 MBTPS1Q14703 1052 aa29.15■■■□□ 2.26
CCM2-201ENST00000258781 PKDCCQ504Y2 493 aa29.15■■■□□ 2.26
CCM2-201ENST00000258781 ARHGAP17Q68EM7 881 aa29.15■■■□□ 2.26
CCM2-201ENST00000258781 POLNQ7Z5Q5 900 aa29.15■■■□□ 2.26
CCM2-201ENST00000258781 C12orf29Q8N999 325 aa29.15■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms