RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 C15orf59Q2T9L4 293 aaPredicted RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 ZNF484Q5JVG2 852 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 ILDR2Q71H61 639 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 DNPEPQ9ULA0 475 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 TNFSF13BQ9Y275 285 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 MRPL42Q9Y6G3 142 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 LCTP09848 1927 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 ATF2P15336 505 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 MMP8P22894 467 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 PTGIRP43119 386 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 SMAD1Q15797 465 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 OLFML2BQ68BL8 750 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 MAMDC4Q6UXC1 1216 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 TLK2Q86UE8 772 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 SCUBE3Q8IX30 993 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 TRIM11Q96F44 468 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 DDX27Q96GQ7 796 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 ELAC2Q9BQ52 826 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 LBHD1Q9BQE6 289 aaPredicted RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 B3GNT5Q9BYG0 378 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 ABHD16BQ9H3Z7 469 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 SBF1O95248 1867 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 IGF2BP3O00425 579 aaKnown RBP eCLIP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 TSPAN1O60635 241 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 PGK1P00558 417 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 CETN2P41208 172 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 SLC26A2P50443 739 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 IFI35P80217 286 aaPredicted RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 PAN2Q504Q3 1202 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 GKAP1Q5VSY0 366 aaPredicted RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 ZC3H18Q86VM9 953 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 ZNF677Q86XU0 584 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 VTA1Q9NP79 307 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 ANAPC5Q9UJX4 755 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 SCINQ9Y6U3 715 aa15.42■□□□□ 0.06
TRAFD1-201ENST00000257604 BANF1O75531 89 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 GAS8O95995 478 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 RARBP10826 455 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 PTPN11Q06124 597 aaPredicted RBP15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 DHX34Q14147 1143 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 ZDHHC24Q6UX98 284 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 CTNNAL1Q9UBT7 734 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 LOXHD1Q8IVV2 1947 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 ATXN2Q99700 1313 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 MAGEB2O15479 319 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 MYBL1P10243 752 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 PAX7P23759 505 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 RAD23BP54727 409 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 PPP6R3Q5H9R7 873 aaPredicted RBP15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 TWF2Q6IBS0 349 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 KIF2BQ8N4N8 673 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 NDRG1Q92597 394 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 ZMAT2Q96NC0 199 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 PTPRHQ9HD43 1115 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 GRHL1Q9NZI5 618 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 IP6K2Q9UHH9 426 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 PTPRFP10586 1907 aa15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 ZNFX1Q9P2E3 1918 aaKnown RBP15.41■□□□□ 0.06
TRAFD1-201ENST00000257604 TNPO2O14787 897 aaKnown RBP15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 STRNO43815 780 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 MICAL2O94851 1124 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 ERBB2P04626 1255 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 SMIM10L2AP0DMW4 78 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 SMIM10L2BP0DMW5 78 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 P3H1Q32P28 736 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 DUSP28Q4G0W2 176 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 MARCH8Q5T0T0 291 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 EMC10Q5UCC4 262 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 ANKRD42Q8N9B4 389 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 KCTD6Q8NC69 237 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 TMEM40Q8WWA1 233 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 MRPL45Q9BRJ2 306 aaKnown RBP15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 KCNK9Q9NPC2 374 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 TIMM13Q9Y5L4 95 aaPredicted RBP15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 ASAP2O43150 1006 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 GAS2O43903 313 aaKnown RBP15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 CALB1P05937 261 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 ACAT1P24752 427 aaKnown RBP15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 ELF1P32519 619 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 CLNS1AP54105 237 aaKnown RBP15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 ZNF252P-AS1Q0IIN9 211 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 MMRN1Q13201 1228 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 ZNF618Q5T7W0 954 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 CST9Q5W186 159 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 LRIG3Q6UXM1 1119 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 FAM81BQ96LP2 452 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 PAIP2Q9BPZ3 127 aaKnown RBP15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 ABT1Q9ULW3 272 aaKnown RBP15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 STK38LQ9Y2H1 464 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 E5RJQ4 531 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 RGS16O15492 202 aaPredicted RBP15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 IGFBP6P24592 240 aaPredicted RBP15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 GCLCP48506 637 aaPredicted RBP15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 GPS1Q13098 491 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 SURF1Q15526 300 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 ZKSCAN8Q15776 578 aaPredicted RBP15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 TRIM72Q6ZMU5 477 aa15.4■□□□□ 0.06
TRAFD1-201ENST00000257604 RFX6Q8HWS3 928 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms