RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 TRPV4Q9HBA0 871 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 ARHGEF3Q9NR81 526 aa24.52■■□□□ 1.52
LSM4-201ENST00000252816 TRIM49BA6NDI0 452 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 CETN3O15182 167 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 CLSTN1O94985 981 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 ASS1P00966 412 aaKnown RBP24.51■■□□□ 1.51
LSM4-201ENST00000252816 CD44P16070 742 aaKnown RBP24.51■■□□□ 1.51
LSM4-201ENST00000252816 BMP6P22004 513 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 MAGEA11P43364 429 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 CLCN5P51795 746 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 CYP4F8P98187 520 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 GRM2Q14416 872 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 MDH1BQ5I0G3 518 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 GPR158Q5T848 1215 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 SPOPLQ6IQ16 392 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 VITQ6UXI7 678 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 GPIHBP1Q8IV16 184 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 ZC3H3Q8IXZ2 948 aaKnown RBP24.51■■□□□ 1.51
LSM4-201ENST00000252816 RSPRY1Q96DX4 576 aa24.51■■□□□ 1.51
LSM4-201ENST00000252816 GTPBP4Q9BZE4 634 aaKnown RBP24.51■■□□□ 1.51
LSM4-201ENST00000252816 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.51■■□□□ 1.511e-9■■■■■ 59.3
LSM4-201ENST00000252816 MAGEC2Q9UBF1 373 aaPredicted RBP24.51■■□□□ 1.51
LSM4-201ENST00000252816 A8MXQ7 604 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 PI15O43692 258 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 CSH1P0DML2 217 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 CSH2P0DML3 217 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 PTPN1P18031 435 aaKnown RBP24.5■■□□□ 1.51
LSM4-201ENST00000252816 BDNFP23560 247 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 CDC25CP30307 473 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 PIK3CAP42336 1068 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 NLRP12P59046 1061 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 UBE2HP62256 183 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 CYP27A1Q02318 531 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 MAPRE1Q15691 268 aaKnown RBP24.5■■□□□ 1.51
LSM4-201ENST00000252816 SCN4BQ8IWT1 228 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 PRSS33Q8NF86 280 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 TAS1R2Q8TE23 839 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 TSG101Q99816 390 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 KCNH6Q9H252 994 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 MMRN2Q9H8L6 949 aa24.5■■□□□ 1.51
LSM4-201ENST00000252816 MAGED2Q9UNF1 606 aaPredicted RBP24.5■■□□□ 1.51
LSM4-201ENST00000252816 SLC38A8A6NNN8 435 aa24.49■■□□□ 1.51
LSM4-201ENST00000252816 NOL4O94818 638 aa24.49■■□□□ 1.51
LSM4-201ENST00000252816 F11P03951 625 aa24.49■■□□□ 1.51
LSM4-201ENST00000252816 EPB41P11171 864 aaKnown RBP24.49■■□□□ 1.51
LSM4-201ENST00000252816 ARID3BQ8IVW6 561 aaPredicted RBP24.49■■□□□ 1.51
LSM4-201ENST00000252816 B3GALNT2Q8NCR0 500 aa24.49■■□□□ 1.51
LSM4-201ENST00000252816 TAF4BQ92750 862 aa24.49■■□□□ 1.51
LSM4-201ENST00000252816 TASP1Q9H6P5 420 aa24.49■■□□□ 1.51
LSM4-201ENST00000252816 TBC1D17Q9HA65 648 aa24.49■■□□□ 1.51
LSM4-201ENST00000252816 APOBEC3GQ9HC16 384 aaKnown RBP24.49■■□□□ 1.51
LSM4-201ENST00000252816 HEPACAM2A8MVW5 462 aa24.48■■□□□ 1.51
LSM4-201ENST00000252816 LRRN2O75325 713 aa24.48■■□□□ 1.51
LSM4-201ENST00000252816 AOC1P19801 751 aa24.48■■□□□ 1.51
LSM4-201ENST00000252816 FKBP3Q00688 224 aaKnown RBP24.48■■□□□ 1.51
LSM4-201ENST00000252816 PFKPQ01813 784 aa24.48■■□□□ 1.51
LSM4-201ENST00000252816 COL4A3Q01955 1670 aa24.48■■□□□ 1.51
LSM4-201ENST00000252816 MORC3Q14149 939 aa24.48■■□□□ 1.51
LSM4-201ENST00000252816 SLC44A4Q53GD3 710 aa24.48■■□□□ 1.51
LSM4-201ENST00000252816 ARHGAP15Q53QZ3 475 aa24.48■■□□□ 1.51
LSM4-201ENST00000252816 VSTM1Q6UX27 236 aa24.48■■□□□ 1.51
LSM4-201ENST00000252816 MYRFLQ96LU7 910 aa24.48■■□□□ 1.51
LSM4-201ENST00000252816 GCNAQ96QF7 691 aa24.48■■□□□ 1.51
LSM4-201ENST00000252816 TRMT61BQ9BVS5 477 aaKnown RBP24.48■■□□□ 1.51
LSM4-201ENST00000252816 TMEM8AQ9HCN3 771 aa24.48■■□□□ 1.51
LSM4-201ENST00000252816 BIN1O00499 593 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 TADA3O75528 432 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 P4HA1P13674 534 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 PSMC3P17980 439 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 CCNE1P24864 410 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 GTF2H1P32780 548 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 ASPAP45381 313 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 LRRC63Q05C16 580 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 TRMT2BQ96GJ1 504 aaKnown RBP24.47■■□□□ 1.51
LSM4-201ENST00000252816 DHTKD1Q96HY7 919 aaPredicted RBP24.47■■□□□ 1.51
LSM4-201ENST00000252816 LRRC3BQ96PB8 259 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 SLC46A2Q9BY10 475 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 B3GNT5Q9BYG0 378 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 ZNF518BQ9C0D4 1074 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 TMEM30AQ9NV96 361 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 PTPRDP23468 1912 aa24.47■■□□□ 1.51
LSM4-201ENST00000252816 PPP1R3GB7ZBB8 358 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 CLDN5O00501 218 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 STK25O00506 426 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 PSMA7O14818 248 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 SLC16A3O15427 465 aaKnown RBP24.46■■□□□ 1.51
LSM4-201ENST00000252816 PRAMEF12O95522 483 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 GDI1P31150 447 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 GRIK1P39086 918 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 CACNA2D1P54289 1103 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 STARD6P59095 220 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 NOP14P78316 857 aaKnown RBP24.46■■□□□ 1.51
LSM4-201ENST00000252816 STIM1Q13586 685 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 MLF2Q15773 248 aaPredicted RBP24.46■■□□□ 1.51
LSM4-201ENST00000252816 PHLDB3Q6NSJ2 640 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 MFSD6LQ8IWD5 586 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 DEPDC1BQ8WUY9 529 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 SEMA4DQ92854 862 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 SPATA17Q96L03 361 aa24.46■■□□□ 1.51
LSM4-201ENST00000252816 BRD9Q9H8M2 597 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms