RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ARHGEF37A1IGU5 675 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 THAP12O43422 761 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 BUB1O43683 1085 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 CILPO75339 1184 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 KIF4AO95239 1232 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 IL9P15248 144 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 IRS1P35568 1242 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 NOMO3P69849 1222 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 DLX2Q07687 328 aaPredicted RBP14□□□□□ -0.17
SLIRP-201ENST00000238688 HYAL1Q12794 435 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 SV2CQ496J9 727 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 SPOPLQ6IQ16 392 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 DAAM2Q86T65 1068 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 CDR2LQ86X02 465 aaPredicted RBP14□□□□□ -0.17
SLIRP-201ENST00000238688 MCOLN2Q8IZK6 566 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 ZNF606Q8WXB4 792 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 PGBD4Q96DM1 585 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 PABPC5Q96DU9 382 aaKnown RBP14□□□□□ -0.17
SLIRP-201ENST00000238688 HES6Q96HZ4 224 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 PCDHB18PQ96TA0 734 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 THAP2Q9H0W7 228 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 CARD9Q9H257 536 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 SNTG2Q9NY99 539 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 CTTNBP2NLQ9P2B4 639 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 WDR35Q9P2L0 1181 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 AGAP1Q9UPQ3 857 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 IPPQ9Y573 584 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 PCDHB7Q9Y5E2 793 aa14□□□□□ -0.17
SLIRP-201ENST00000238688 TARSL2A2RTX5 802 aaKnown RBP13.99□□□□□ -0.17
SLIRP-201ENST00000238688 GRXCR2A6NFK2 248 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 H3BQ06 376 aaPredicted RBP13.99□□□□□ -0.17
SLIRP-201ENST00000238688 INPPL1O15357 1258 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 MEFVO15553 781 aaPredicted RBP13.99□□□□□ -0.17
SLIRP-201ENST00000238688 SETSIPP0DME0 302 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 FGFR1P11362 822 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 VDRP11473 427 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 IBSPP21815 317 aaPredicted RBP13.99□□□□□ -0.17
SLIRP-201ENST00000238688 FGFR4P22455 802 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 RPL9P32969 192 aaKnown RBP13.99□□□□□ -0.17
SLIRP-201ENST00000238688 MAN1A1P33908 653 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 GLE1Q53GS7 698 aaKnown RBP13.99□□□□□ -0.17
SLIRP-201ENST00000238688 CCDC181Q5TID7 509 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 TAF3Q5VWG9 929 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 MON1BQ7L1V2 547 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 PDCL2Q8N4E4 241 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 UBL4BQ8N7F7 174 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 ACTRT1Q8TDG2 376 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 ANKRD7Q92527 254 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 ZNF653Q96CK0 615 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 EIF2AQ9BY44 585 aaKnown RBP13.99□□□□□ -0.17
SLIRP-201ENST00000238688 CWH43Q9H720 699 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 ELAC1Q9H777 363 aaKnown RBP13.99□□□□□ -0.17
SLIRP-201ENST00000238688 FAM105AQ9NUU6 356 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 TMEM161AQ9NX61 479 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 LRFN2Q9ULH4 789 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 TFR2Q9UP52 801 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 TDRD15B5MCY1 1934 aaKnown RBP13.99□□□□□ -0.17
SLIRP-201ENST00000238688 C5orf42Q9H799 3197 aa13.99□□□□□ -0.17
SLIRP-201ENST00000238688 SMIM28A0A1B0GU29 152 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 CCDC66A2RUB6 948 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 TBKBP1A7MCY6 615 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 PIRO00625 290 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 ENC1O14682 589 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 ABCB4P21439 1286 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 MMP8P22894 467 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 CNGA2Q16280 664 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 C9orf57Q5W0N0 161 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 LIMS2Q7Z4I7 341 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 ADGRD2Q7Z7M1 963 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 ZNF598Q86UK7 904 aaKnown RBP13.98□□□□□ -0.17
SLIRP-201ENST00000238688 NT5DC3Q86UY8 548 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 PALB2Q86YC2 1186 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 CREG2Q8IUH2 290 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 ZNF564Q8TBZ8 553 aaPredicted RBP13.98□□□□□ -0.17
SLIRP-201ENST00000238688 POF1BQ8WVV4 589 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 TMEM176AQ96HP8 235 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 CASD1Q96PB1 797 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 NT5C1AQ9BXI3 368 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 NXF3Q9H4D5 531 aaKnown RBP13.98□□□□□ -0.17
SLIRP-201ENST00000238688 EPHX3Q9H6B9 360 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 CYLDQ9NQC7 956 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 PARVAQ9NVD7 372 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 TAS2R14Q9NYV8 317 aa13.98□□□□□ -0.17
SLIRP-201ENST00000238688 NXF1Q9UBU9 619 aaKnown RBP13.98□□□□□ -0.17
SLIRP-201ENST00000238688 A0A0U1RQF3 1178 aa13.97□□□□□ -0.17
SLIRP-201ENST00000238688 TMCO5BA8MYB1 307 aa13.97□□□□□ -0.17
SLIRP-201ENST00000238688 LINC01565O15544 149 aa13.97□□□□□ -0.17
SLIRP-201ENST00000238688 BUB1BO60566 1050 aaPredicted RBP13.97□□□□□ -0.17
SLIRP-201ENST00000238688 ITGA4P13612 1032 aa13.97□□□□□ -0.17
SLIRP-201ENST00000238688 TAF6P49848 677 aa13.97□□□□□ -0.17
SLIRP-201ENST00000238688 PTP4A2Q12974 167 aa13.97□□□□□ -0.17
SLIRP-201ENST00000238688 PLEKHA7Q6IQ23 1121 aa13.97□□□□□ -0.17
SLIRP-201ENST00000238688 PTCRAQ6ISU1 281 aaPredicted RBP13.97□□□□□ -0.17
SLIRP-201ENST00000238688 ECHDC2Q86YB7 292 aa13.97□□□□□ -0.17
SLIRP-201ENST00000238688 MMGT1Q8N4V1 131 aa13.97□□□□□ -0.17
SLIRP-201ENST00000238688 TOP6BLQ8N6T0 577 aa13.97□□□□□ -0.17
SLIRP-201ENST00000238688 SMG8Q8ND04 991 aaKnown RBP13.97□□□□□ -0.17
SLIRP-201ENST00000238688 DDX27Q96GQ7 796 aaKnown RBP13.97□□□□□ -0.17
SLIRP-201ENST00000238688 UROC1Q96N76 676 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms