RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 SEZ6Q53EL9 994 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 ERO1BQ86YB8 467 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 SLC35B2Q8TB61 432 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 C10orf82Q8WW14 230 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 ZNF570Q96NI8 536 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 LRRC37BQ96QE4 947 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 RAB3IPQ96QF0 476 aaPredicted RBP16.34■□□□□ 0.21
CTSD-201ENST00000236671 MAK16Q9BXY0 300 aaKnown RBP16.34■□□□□ 0.21
CTSD-201ENST00000236671 DONSONQ9NYP3 566 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 PSMC3IPQ9P2W1 217 aaPredicted RBP16.34■□□□□ 0.21
CTSD-201ENST00000236671 FARP1Q9Y4F1 1045 aaPredicted RBP16.34■□□□□ 0.21
CTSD-201ENST00000236671 DNAH12Q6ZR08 3092 aa16.34■□□□□ 0.21
CTSD-201ENST00000236671 CLUHO75153 1309 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 RLFQ13129 1914 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 A0A1W2PPM1 405 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 LRRD1A4D1F6 860 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 PEX10O60683 326 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 ATP5HO75947 161 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 SLC10A3P09131 477 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 BRD2P25440 801 aaKnown RBP16.33■□□□□ 0.21
CTSD-201ENST00000236671 GPX6P59796 221 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 SP2Q02086 613 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 PARP6Q2NL67 630 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 EFHC2Q5JST6 749 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 TREML2Q5T2D2 321 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 DCUN1D2Q6PH85 259 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 VSIG1Q86XK7 387 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 NIPA2Q8N8Q9 360 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 LRRC8CQ8TDW0 803 aa16.33■□□□□ 0.21
CTSD-201ENST00000236671 DDX56Q9NY93 547 aaKnown RBP16.33■□□□□ 0.21
CTSD-201ENST00000236671 ZNF214Q9UL59 606 aaPredicted RBP16.33■□□□□ 0.21
CTSD-201ENST00000236671 C3orf70A6NLC5 250 aaPredicted RBP16.33■□□□□ 0.2
CTSD-201ENST00000236671 SGK1O00141 431 aa16.33■□□□□ 0.2
CTSD-201ENST00000236671 NDC80O14777 642 aa16.33■□□□□ 0.2
CTSD-201ENST00000236671 ATP2A1O14983 1001 aa16.33■□□□□ 0.2
CTSD-201ENST00000236671 CST3P01034 146 aaPredicted RBP16.33■□□□□ 0.2
CTSD-201ENST00000236671 OATP04181 439 aa16.33■□□□□ 0.2
CTSD-201ENST00000236671 FGFR1P11362 822 aa16.33■□□□□ 0.2
CTSD-201ENST00000236671 TARSP26639 723 aaKnown RBP16.33■□□□□ 0.2
CTSD-201ENST00000236671 PIGHQ14442 188 aaPredicted RBP16.33■□□□□ 0.2
CTSD-201ENST00000236671 ZNF280CQ8ND82 737 aa16.33■□□□□ 0.2
CTSD-201ENST00000236671 MRRFQ96E11 262 aaKnown RBP16.33■□□□□ 0.2
CTSD-201ENST00000236671 MS4A4AQ96JQ5 239 aa16.33■□□□□ 0.2
CTSD-201ENST00000236671 TMEM237Q96Q45 408 aa16.33■□□□□ 0.2
CTSD-201ENST00000236671 PTPN18Q99952 460 aa16.33■□□□□ 0.2
CTSD-201ENST00000236671 IMPG2Q9BZV3 1241 aa16.33■□□□□ 0.2
CTSD-201ENST00000236671 MAFBQ9Y5Q3 323 aaPredicted RBP16.33■□□□□ 0.2
CTSD-201ENST00000236671 MYH9P35579 1960 aaKnown RBP16.32■□□□□ 0.2
CTSD-201ENST00000236671 GOLGA8SH3BPF8 625 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 GOLGA8MH3BSY2 632 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 DCTN3O75935 186 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 IFNB1P01574 187 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 HARSP12081 509 aaKnown RBP16.32■□□□□ 0.2
CTSD-201ENST00000236671 GAD2Q05329 585 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 EFTUD2Q15029 972 aaKnown RBP eCLIP16.32■□□□□ 0.27e-7■■■■■ 31.5
CTSD-201ENST00000236671 HIF1AQ16665 826 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 ANKMY2Q8IV38 441 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 KIRREL3Q8IZU9 778 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 WDTC1Q8N5D0 677 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 ADAM33Q9BZ11 813 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 SSU72Q9NP77 194 aaKnown RBP16.32■□□□□ 0.2
CTSD-201ENST00000236671 CYLDQ9NQC7 956 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 ZNF302Q9NR11 478 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 SLC5A4Q9NY91 659 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 CYP39A1Q9NYL5 469 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 RABGEF1Q9UJ41 708 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 HAO1Q9UJM8 370 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 SUFUQ9UMX1 484 aa16.32■□□□□ 0.2
CTSD-201ENST00000236671 KIF1CO43896 1103 aaKnown RBP16.31■□□□□ 0.2
CTSD-201ENST00000236671 T-ENOLP0DO92 83 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 ATP2A2P16615 1042 aaKnown RBP16.31■□□□□ 0.2
CTSD-201ENST00000236671 CDH5P33151 784 aaPredicted RBP16.31■□□□□ 0.2
CTSD-201ENST00000236671 PSMC4P43686 418 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 OAZ1P54368 228 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 BACE1P56817 501 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 TAP1Q03518 808 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 GNPTABQ3T906 1256 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 HHATQ5VTY9 493 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 ANKRD22Q5VYY1 191 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 GPAT2Q6NUI2 795 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 OTOAQ7RTW8 1153 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 BRSK2Q8IWQ3 736 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 AGGF1Q8N302 714 aaeCLIP16.31■□□□□ 0.2
CTSD-201ENST00000236671 TMEM35BQ8NCS4 154 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 INPP5DQ92835 1189 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 WDR83Q9BRX9 315 aaKnown RBP16.31■□□□□ 0.2
CTSD-201ENST00000236671 PHACTR1Q9C0D0 580 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 FETUBQ9UGM5 382 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 FAM189A1O60320 539 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 STAM2O75886 525 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 KRT4P19013 534 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 ALDH3A1P30838 453 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 TNFSF9P41273 254 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 CCNG1P51959 295 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 GDF10P55107 478 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 GEMIN4P57678 1058 aaKnown RBP16.31■□□□□ 0.2
CTSD-201ENST00000236671 PLCB3Q01970 1234 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 NAA25Q14CX7 972 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 CYP4A22Q5TCH4 519 aa16.31■□□□□ 0.2
CTSD-201ENST00000236671 LVRNQ6Q4G3 990 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms