RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 DENND4AQ7Z401 1863 aa12.05□□□□□ -0.48
SF3B6-201ENST00000233468 A8MXQ7 604 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 MTIF2P46199 727 aaKnown RBP12.04□□□□□ -0.48
SF3B6-201ENST00000233468 FMO5P49326 533 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 EPHB3P54753 998 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 YWHAEP62258 255 aaKnown RBP12.04□□□□□ -0.48
SF3B6-201ENST00000233468 NOP14P78316 857 aaKnown RBP12.04□□□□□ -0.48
SF3B6-201ENST00000233468 VEPH1Q14D04 833 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 RNF19BQ6ZMZ0 732 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 ITIH5Q86UX2 942 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 UNC93AQ86WB7 457 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 SPATA2LQ8IUW3 424 aaPredicted RBP12.04□□□□□ -0.48
SF3B6-201ENST00000233468 TRIM59Q8IWR1 403 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 LEMD2Q8NC56 503 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 OR10T2Q8NGX3 314 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 ACSF2Q96CM8 615 aaPredicted RBP12.04□□□□□ -0.48
SF3B6-201ENST00000233468 FUBP3Q96I24 572 aaKnown RBP eCLIP12.04□□□□□ -0.48
SF3B6-201ENST00000233468 CNOT6LQ96LI5 555 aaKnown RBP12.04□□□□□ -0.48
SF3B6-201ENST00000233468 ZNF512Q96ME7 567 aaPredicted RBP12.04□□□□□ -0.48
SF3B6-201ENST00000233468 SYT15Q9BQS2 421 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 NIF3L1Q9GZT8 377 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 ABCB6Q9NP58 842 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 TMEM63CQ9P1W3 806 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 POLIQ9UNA4 740 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 COQ4Q9Y3A0 265 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 ASB3Q9Y575 518 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 INSL5Q9Y5Q6 135 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 CITO14578 2027 aa12.04□□□□□ -0.48
SF3B6-201ENST00000233468 DOCK6Q96HP0 2047 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 DMDP11532 3685 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 MTMR11A4FU01 709 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 RFPL2O75678 378 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 OR4Q2P0C623 313 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 TBXAS1P24557 533 aaPredicted RBP12.03□□□□□ -0.48
SF3B6-201ENST00000233468 RPL10AP62906 217 aaKnown RBP12.03□□□□□ -0.48
SF3B6-201ENST00000233468 LSM11P83369 360 aaKnown RBP eCLIP12.03□□□□□ -0.48
SF3B6-201ENST00000233468 KCNH2Q12809 1159 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 DUSP4Q13115 394 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 TAF12Q16514 161 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 MGAT5BQ3V5L5 792 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 CYP4A22Q5TCH4 519 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 OTOP3Q7RTS5 596 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 KBTBD7Q8WVZ9 684 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 FAM81BQ96LP2 452 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 PGLYRP2Q96PD5 576 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 RTP3Q9BQQ7 232 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 MRPL45Q9BRJ2 306 aaKnown RBP12.03□□□□□ -0.48
SF3B6-201ENST00000233468 WDR6Q9NNW5 1121 aaKnown RBP12.03□□□□□ -0.48
SF3B6-201ENST00000233468 LIMD1Q9UGP4 676 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 USTQ9Y2C2 406 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 ATP8B3O60423 1300 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 PTPRZ1P23471 2315 aaPredicted RBP12.03□□□□□ -0.48
SF3B6-201ENST00000233468 FRYLO94915 3013 aa12.03□□□□□ -0.48
SF3B6-201ENST00000233468 ARHGAP33O14559 1287 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 ZNF197O14709 1029 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 CCL16O15467 120 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 FGF19O95750 216 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 CAVIN2O95810 425 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 PDGFRBP09619 1106 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 PTPN2P17706 415 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 EEF1GP26641 437 aaKnown RBP12.02□□□□□ -0.49
SF3B6-201ENST00000233468 TYRO3Q06418 890 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 TWF1Q12792 350 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 CFAP221Q4G0U5 840 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 CBWD6Q4V339 395 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 CBWD3Q5JTY5 395 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 CBWD5Q5RIA9 395 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 FAM171BQ6P995 826 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 SCARA5Q6ZMJ2 495 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 OSTM1Q86WC4 334 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 TMEM105Q8N8V8 129 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 ATAD1Q8NBU5 361 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 MYCBPAPQ8TBZ2 947 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 FAM200AQ8TCP9 573 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 ATOH1Q92858 354 aaPredicted RBP12.02□□□□□ -0.49
SF3B6-201ENST00000233468 ZNF707Q96C28 371 aaPredicted RBP12.02□□□□□ -0.49
SF3B6-201ENST00000233468 CEP295NLQ96MC4 621 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 NT5C1BQ96P26 610 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 SEPT5Q99719 369 aaPredicted RBP12.02□□□□□ -0.49
SF3B6-201ENST00000233468 PI4K2AQ9BTU6 479 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 BCO2Q9BYV7 579 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 SMYD3Q9H7B4 428 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 ABI2Q9NYB9 513 aaPredicted RBP12.02□□□□□ -0.49
SF3B6-201ENST00000233468 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.02□□□□□ -0.49
SF3B6-201ENST00000233468 EHD2Q9NZN4 543 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 SORCS3Q9UPU3 1222 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 NFE2L3Q9Y4A8 694 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 YIPF1Q9Y548 306 aa12.02□□□□□ -0.49
SF3B6-201ENST00000233468 ZFP37Q9Y6Q3 630 aaPredicted RBP12.02□□□□□ -0.49
SF3B6-201ENST00000233468 RIF1Q5UIP0 2472 aaKnown RBP12.01□□□□□ -0.49
SF3B6-201ENST00000233468 SMTNL1A8MU46 457 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 SEC24AO95486 1093 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 HAPLN1P10915 354 aaPredicted RBP12.01□□□□□ -0.49
SF3B6-201ENST00000233468 PTPN1P18031 435 aaKnown RBP12.01□□□□□ -0.49
SF3B6-201ENST00000233468 ACAT1P24752 427 aaKnown RBP12.01□□□□□ -0.49
SF3B6-201ENST00000233468 LMO2P25791 158 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 MAGEA11P43364 429 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 ASPAP45381 313 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 MYL5Q02045 173 aa12.01□□□□□ -0.49
SF3B6-201ENST00000233468 MAN2A1Q16706 1144 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms