RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 BRD2P25440 801 aaKnown RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 ECHS1P30084 290 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 MRPS25P82663 173 aaKnown RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 MYO1EQ12965 1108 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 MTMR3Q13615 1198 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 HLTFQ14527 1009 aaKnown RBP eCLIP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 SKIV2LQ15477 1246 aaKnown RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 KIZQ2M2Z5 673 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 SCARA5Q6ZMJ2 495 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 CATSPER4Q7RTX7 472 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 ERICH1Q86X53 443 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 C1orf131Q8NDD1 294 aaKnown RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 FNIP1Q8TF40 1166 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 EXOC4Q96A65 974 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 DDX27Q96GQ7 796 aaKnown RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 HPDLQ96IR7 371 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 RUFY1Q96T51 708 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 MIS12Q9H081 205 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 IL23AQ9NPF7 189 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 ST7Q9NRC1 585 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 DPP3Q9NY33 737 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 NXF1Q9UBU9 619 aaKnown RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 CSDE1O75534 798 aaKnown RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 SYF2O95926 243 aaKnown RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 ACRP10323 421 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 HOXA11P31270 313 aaPredicted RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 CETN2P41208 172 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 YARSP54577 528 aaKnown RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 RAD23BP54727 409 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 PTPN11Q06124 597 aaPredicted RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 PIGHQ14442 188 aaPredicted RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 PPP1R15BQ5SWA1 713 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 DUPD1Q68J44 220 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 DNAJC24Q6P3W2 148 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 SYDE1Q6ZW31 735 aaPredicted RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 JAMLQ86YT9 394 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 LRRC52Q8N7C0 313 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 KLHDC9Q8NEP7 349 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 EXD1Q8NHP7 514 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 MAGOHBQ96A72 148 aaKnown RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 SNX27Q96L92 541 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 ERVK-5Q9HDB9 667 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 FEZ2Q9UHY8 353 aaPredicted RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 BARX2Q9UMQ3 279 aaPredicted RBP13.87□□□□□ -0.19
COPS7A-201ENST00000229251 NR2E1Q9Y466 385 aa13.87□□□□□ -0.19
COPS7A-201ENST00000229251 SCN1AP35498 2009 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 GOLGA8KD6RF30 607 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 AGPSO00116 658 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 DUSP11O75319 330 aaKnown RBP13.86□□□□□ -0.19
COPS7A-201ENST00000229251 VDRP11473 427 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 GGCXP38435 758 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 CDK7P50613 346 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 SIX1Q15475 284 aaPredicted RBP13.86□□□□□ -0.19
COPS7A-201ENST00000229251 KCNA10Q16322 511 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 PPP2R2DQ66LE6 453 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 SCARA3Q6AZY7 606 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 TAF2Q6P1X5 1199 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 CCDC137Q6PK04 289 aaKnown RBP13.86□□□□□ -0.19
COPS7A-201ENST00000229251 ALYREFQ86V81 257 aaKnown RBP13.86□□□□□ -0.19
COPS7A-201ENST00000229251 IQCKQ8N0W5 287 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 PCSK9Q8NBP7 692 aaKnown RBP13.86□□□□□ -0.19
COPS7A-201ENST00000229251 SLC4A11Q8NBS3 891 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 TFAP2BQ92481 460 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 KIF12Q96FN5 646 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 TMEM176AQ96HP8 235 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 RBM41Q96IZ5 413 aaKnown RBP13.86□□□□□ -0.19
COPS7A-201ENST00000229251 GDAP1L1Q96MZ0 367 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 PPP1R16BQ96T49 567 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 FAM49AQ9H0Q0 323 aaPredicted RBP13.86□□□□□ -0.19
COPS7A-201ENST00000229251 CNTN3Q9P232 1028 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 POLIQ9UNA4 740 aa13.86□□□□□ -0.19
COPS7A-201ENST00000229251 YBX2Q9Y2T7 364 aaKnown RBP13.86□□□□□ -0.19
COPS7A-201ENST00000229251 PRRC2BQ5JSZ5 2229 aaKnown RBP13.85□□□□□ -0.19
COPS7A-201ENST00000229251 POLR3GO15318 223 aaPredicted RBP13.85□□□□□ -0.19
COPS7A-201ENST00000229251 XPOTO43592 962 aaKnown RBP13.85□□□□□ -0.19
COPS7A-201ENST00000229251 RNF40O75150 1001 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 NPTXRO95502 500 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 FGBP02675 491 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 CST5P28325 142 aaPredicted RBP13.85□□□□□ -0.19
COPS7A-201ENST00000229251 COILP38432 576 aaPredicted RBP13.85□□□□□ -0.19
COPS7A-201ENST00000229251 PTGIRP43119 386 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 CRYBB1P53674 252 aaPredicted RBP13.85□□□□□ -0.19
COPS7A-201ENST00000229251 COPS2P61201 443 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 NKX3-2P78367 333 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 ZBTB6Q15916 424 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 CNGA2Q16280 664 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 FSCN1Q16658 493 aaKnown RBP13.85□□□□□ -0.19
COPS7A-201ENST00000229251 ZNF394Q53GI3 561 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 CFAP58Q5T655 872 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 CCSAPQ6IQ19 270 aaPredicted RBP13.85□□□□□ -0.19
COPS7A-201ENST00000229251 LRIG3Q6UXM1 1119 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 BEST2Q8NFU1 509 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 GRK7Q8WTQ7 553 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 LENG1Q96BZ8 264 aaPredicted RBP13.85□□□□□ -0.19
COPS7A-201ENST00000229251 PPP1R12CQ9BZL4 782 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 SMYD3Q9H7B4 428 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.85□□□□□ -0.19
COPS7A-201ENST00000229251 AGAP1Q9UPQ3 857 aa13.85□□□□□ -0.19
COPS7A-201ENST00000229251 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.85□□□□□ -0.19
COPS7A-201ENST00000229251 C17orf102A2RUQ5 167 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms