RNA–Protein interactions for RNA: ENST00000228425.10

PPFIBP1-201, Transcript of PPFIA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIBP1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-201ENST00000228425 CTIFO43310 598 aaKnown RBP6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 PRPF3O43395 683 aaKnown RBP6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 RHOBTB1O94844 696 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 ADORA1P30542 326 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 PSMC2P35998 433 aaKnown RBP6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 STT3AP46977 705 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 RFX3P48380 749 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 IFNAR2P48551 515 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 SIK1P57059 783 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 DEFA1P59665 94 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 DEFA3P59666 94 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 MORC3Q14149 939 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 MAPRE2Q15555 327 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 HIST2H2ACQ16777 129 aaPredicted RBP6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 MFSD14BQ5SR56 506 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 NAA35Q5VZE5 725 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 RESP18Q5W5W9 173 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 HIST2H2AA3Q6FI13 130 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 IYDQ6PHW0 289 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 NLRP10Q86W26 655 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 NAXEQ8NCW5 288 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 BEST2Q8NFU1 509 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 TRPM4Q8TD43 1214 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 SLC4A9Q96Q91 983 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 FUCA2Q9BTY2 467 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 ISCA1Q9BUE6 129 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 COPS7BQ9H9Q2 264 aaPredicted RBP6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 EIF2B3Q9NR50 452 aaKnown RBP6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 ADA2Q9NZK5 511 aa6.21□□□□□ -1.42
PPFIBP1-201ENST00000228425 PRAMEF22A3QJZ6 481 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 PDPK1O15530 556 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 COPB1P53618 953 aaKnown RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 HNRNPH2P55795 449 aaKnown RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 AP1S2P56377 157 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 RPS7P62081 194 aaKnown RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 DHX9Q08211 1270 aaKnown RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 SLFN13Q68D06 897 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 LRRC8EQ6NSJ5 796 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 MZT2BQ6NZ67 158 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 TMEM154Q6P9G4 183 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 TAS1R3Q7RTX0 852 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 ELOA2Q8IYF1 753 aaPredicted RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 C7orf61Q8IZ16 206 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 BTBD6Q96KE9 485 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 GCOM2Q9BZD3 368 aaPredicted RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 EPB41L4AQ9HCS5 686 aaPredicted RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 POLR1DQ9Y2S0 133 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 IPPQ9Y573 584 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 C5orf42Q9H799 3197 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 TAF4O00268 1085 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 KPNA6O60684 536 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 TRIM13O60858 407 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 CLUP10909 449 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 CLCN6P51797 869 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 HIRAP54198 1017 aaPredicted RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 NR1H3Q13133 447 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 NR6A1Q15406 480 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 ANKRD40Q6AI12 368 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 CENPUQ71F23 418 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 CCNYL1Q8N7R7 359 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 TTLL11Q8NHH1 800 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 SPIRE2Q8WWL2 714 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 CLIC6Q96NY7 704 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 VPS11Q9H270 941 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 GREM2Q9H772 168 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 TMEM206Q9H813 350 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 CYP4F11Q9HBI6 524 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 NGRNQ9NPE2 291 aaKnown RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 RNF19AQ9NV58 838 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 ERAP1Q9NZ08 941 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 SRP68Q9UHB9 627 aaKnown RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 PIP5K1CO60331 668 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 TBC1D4O60343 1298 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 CDC40O60508 579 aaKnown RBP eCLIP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 PSMA2P25787 234 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 LSP1P33241 339 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 RGS2P41220 211 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 DOK7Q18PE1 504 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 TLK2Q86UE8 772 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 HORMAD1Q86X24 394 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 MMGT1Q8N4V1 131 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 PYROXD1Q8WU10 500 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 ADNPQ9H2P0 1102 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 TMEM165Q9HC07 324 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 CCDC177Q9NQR7 707 aaPredicted RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 EXOC1LA0A1B0GW35 172 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 COPEO14579 308 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 SMAD7O15105 426 aaKnown RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 KRT37O76014 449 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 AFPP02771 609 aaKnown RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 PRKAR2AP13861 404 aaKnown RBP6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 GNA15P30679 374 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 CNTN1Q12860 1018 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 SNX17Q15036 470 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 MTFR1Q15390 333 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 FAM47AQ5JRC9 791 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 FBXO38Q6PIJ6 1188 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 SLC30A9Q6PML9 568 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 CAMK1DQ8IU85 385 aa6.2□□□□□ -1.42
PPFIBP1-201ENST00000228425 MICALL2Q8IY33 904 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms