RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 PPIL6Q8IXY8 311 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 MROH8Q9H579 483 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 ASB7Q9H672 318 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 KCNH4Q9UQ05 1017 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 CHUKO15111 745 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 KRT19P08727 400 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 ETS1P14921 441 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 GCAP28676 217 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 PTPN11Q06124 597 aaPredicted RBP23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 TTLL4Q14679 1199 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 TMEM63BQ5T3F8 832 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 SULF1Q8IWU6 871 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 PARP9Q8IXQ6 854 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 MAGEC3Q8TD91 643 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 MCRS1Q96EZ8 462 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 ADARB2Q9NS39 739 aaKnown RBP23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 ERAP1Q9NZ08 941 aa23.1■■□□□ 1.29
SMARCD2-201ENST00000225742 MAGEB2O15479 319 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 B4GALT5O43286 388 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 ATP2C2O75185 946 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 CILPO75339 1184 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 PGK2P07205 417 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 CXCL8P10145 99 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 OSBPP22059 807 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 PHBP35232 272 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 MYO1EQ12965 1108 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 C1orf127Q8N9H9 656 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 SLC4A11Q8NBS3 891 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 CMASQ8NFW8 434 aaPredicted RBP23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 JOSD2Q8TAC2 188 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 ACTL9Q8TC94 416 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 TMEM176AQ96HP8 235 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 TMEM121Q9BTD3 319 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 MIS12Q9H081 205 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 SYNCQ9H7C4 482 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 ELP3Q9H9T3 547 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 SSU72Q9NP77 194 aaKnown RBP23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 PRKAG3Q9UGI9 489 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 CYTH4Q9UIA0 394 aa23.09■■□□□ 1.29
SMARCD2-201ENST00000225742 MGAMO43451 1857 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 SPDYE5A6NIY4 337 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 LACTBL1A8MY62 500 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 C22orf31O95567 290 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 HMGCRP04035 888 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 TXNP10599 105 aaKnown RBP23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 VDRP11473 427 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 ARL4CP56559 192 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 OSTNP61366 133 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 OTUD4Q01804 1114 aaKnown RBP23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 ACVR2BQ13705 512 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 MTFR1Q15390 333 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 SNCBQ16143 134 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 GALNTL6Q49A17 601 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 RGS9BPQ6ZS82 235 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 ARFGAP1Q8N6T3 406 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 GDAP1Q8TB36 358 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 ZWILCHQ9H900 591 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 VPS37BQ9H9H4 285 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 RBPJLQ9UBG7 517 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 KIAA1257Q9ULG3 409 aa23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.08■■□□□ 1.29
SMARCD2-201ENST00000225742 ASB14A6NK59 587 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 CST8O60676 142 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 STAG3L1P0CL83 205 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 PCK1P35558 622 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 PDIA2Q13087 525 aaKnown RBP23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 HIF1AQ16665 826 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 RNF43Q68DV7 783 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 CCDC125Q86Z20 511 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 ANKRD13AQ8IZ07 590 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 CEP120Q8N960 986 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 CCDC63Q8NA47 563 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 TRAPPC12Q8WVT3 735 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 OTUD5Q96G74 571 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 CPXM1Q96SM3 734 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 SDCBP2Q9H190 292 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 TRABDQ9H4I3 376 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 ASNSD1Q9NWL6 643 aa23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.08■■□□□ 1.28
SMARCD2-201ENST00000225742 GPR25O00155 361 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 RNF8O76064 485 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 STAU1O95793 577 aaKnown RBP23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 IFNB1P01574 187 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 NFICP08651 508 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 TAC1P20366 129 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 IL1R2P27930 398 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 RAP1GAPP47736 663 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 CLCN3P51790 818 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 PPIL2Q13356 520 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 ZC3H12AQ5D1E8 599 aaKnown RBP23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 EFHC2Q5JST6 749 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 FBXO16Q8IX29 292 aaPredicted RBP23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 ZBED8Q8IZ13 594 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 SHCBP1Q8NEM2 672 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 DENND1AQ8TEH3 1009 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 RSAD2Q8WXG1 361 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 ACSF2Q96CM8 615 aaPredicted RBP23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 HAUS1Q96CS2 278 aa23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 METTL5Q9NRN9 209 aaKnown RBP23.07■■□□□ 1.28
SMARCD2-201ENST00000225742 PSMC3IPQ9P2W1 217 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms