RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 TAS2R40P59535 323 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 OGDHQ02218 1023 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 TRAF7Q6Q0C0 670 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 FNIP1Q8TF40 1166 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 FUT8Q9BYC5 575 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 DPEP3Q9H4B8 488 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 RSAD1Q9HA92 442 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 MAATS1Q7Z4T9 603 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 FAM49BQ9NUQ9 324 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.71■□□□□ 0.11
CCDC47-201ENST00000225726 MTUS1Q9ULD2 1270 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 NR2E1Q9Y466 385 aa15.71■□□□□ 0.11
CCDC47-201ENST00000225726 RPL9P32969 192 aaKnown RBP15.7■□□□□ 0.1
CCDC47-201ENST00000225726 SCNN1GP51170 649 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 GUCY2DQ02846 1103 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 LRRC38Q5VT99 294 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 HDXQ7Z353 690 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 ADAT2Q7Z6V5 191 aaKnown RBP15.7■□□□□ 0.1
CCDC47-201ENST00000225726 METTL5Q9NRN9 209 aaKnown RBP15.7■□□□□ 0.1
CCDC47-201ENST00000225726 PODXLO00592 558 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 CYB561D2O14569 222 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 FSCN2O14926 492 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 PHF2O75151 1096 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 MYBL2P10244 700 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 DAB2IPQ5VWQ8 1189 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 TTC30AQ86WT1 665 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 MAIP1Q8WWC4 291 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 TNIP3Q96KP6 325 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 EPB41L5Q9HCM4 733 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 FAM53CQ9NYF3 392 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 BHMG1C9JSJ3 638 aaPredicted RBP15.7■□□□□ 0.1
CCDC47-201ENST00000225726 CAPN15O75808 1086 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 PDGFRBP09619 1106 aa15.7■□□□□ 0.1
CCDC47-201ENST00000225726 SSR1P43307 286 aaKnown RBP15.7■□□□□ 0.1
CCDC47-201ENST00000225726 AENQ8WTP8 325 aaKnown RBP15.7■□□□□ 0.1
CCDC47-201ENST00000225726 LMO2P25791 158 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 RFC1P35251 1148 aaPredicted RBP15.69■□□□□ 0.1
CCDC47-201ENST00000225726 AFF1P51825 1210 aaKnown RBP15.69■□□□□ 0.1
CCDC47-201ENST00000225726 SNX16P57768 344 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 OSTM1Q86WC4 334 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 ECHDC2Q86YB7 292 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 EXD1Q8NHP7 514 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 JOSD2Q8TAC2 188 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 SH3TC2Q8TF17 1288 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 STK32AQ8WU08 396 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 ST7Q9NRC1 585 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 OGFRQ9NZT2 677 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 MAP2K7O14733 419 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 HCRTO43612 131 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 SASH3O75995 380 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 PSMA2P25787 234 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 CHRNA3P32297 505 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 CYP1B1Q16678 543 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 PRELID2Q8N945 189 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 HINFPQ9BQA5 517 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 SLC4A5Q9BY07 1137 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 AMACRQ9UHK6 382 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 F8VP50 259 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 EPHB4P54760 987 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 DHX34Q14147 1143 aaKnown RBP15.69■□□□□ 0.1
CCDC47-201ENST00000225726 SIX1Q15475 284 aaPredicted RBP15.69■□□□□ 0.1
CCDC47-201ENST00000225726 GSPT2Q8IYD1 628 aaKnown RBP15.69■□□□□ 0.1
CCDC47-201ENST00000225726 RNF169Q8NCN4 708 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 SLC35F5Q8WV83 523 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 SENP8Q96LD8 212 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 RUNDC3BQ96NL0 473 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 RGS18Q9NS28 235 aa15.69■□□□□ 0.1
CCDC47-201ENST00000225726 E5RJQ4 531 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 DNM1LO00429 736 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 CLCNKBP51801 687 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 BCAT1P54687 386 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 BST2Q10589 180 aaKnown RBP15.68■□□□□ 0.1
CCDC47-201ENST00000225726 GRIK3Q13003 919 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 FAM102AQ5T9C2 384 aaPredicted RBP15.68■□□□□ 0.1
CCDC47-201ENST00000225726 ZNF598Q86UK7 904 aaKnown RBP15.68■□□□□ 0.1
CCDC47-201ENST00000225726 TMEM86AQ8N2M4 240 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 EIF1ADQ8N9N8 165 aaKnown RBP15.68■□□□□ 0.1
CCDC47-201ENST00000225726 C12orf50Q8NA57 414 aaPredicted RBP15.68■□□□□ 0.1
CCDC47-201ENST00000225726 ANKRD52Q8NB46 1076 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 CASKIN2Q8WXE0 1202 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 UNC93B1Q9H1C4 597 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 OR6B2Q6IFH4 312 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 FAM183BPQ6ZVS7 135 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 ZDHHC14Q8IZN3 488 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 LPIN3Q9BQK8 851 aa15.68■□□□□ 0.1
CCDC47-201ENST00000225726 DDX56Q9NY93 547 aaKnown RBP15.68■□□□□ 0.1
CCDC47-201ENST00000225726 TDRD15B5MCY1 1934 aaKnown RBP15.68■□□□□ 0.1
CCDC47-201ENST00000225726 TCRBV7S2A1N4TA0A589 114 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 FAM187AA6NFU0 413 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 ZSCAN5CA6NGD5 496 aaPredicted RBP15.67■□□□□ 0.1
CCDC47-201ENST00000225726 GABRDO14764 452 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 INPPL1O15357 1258 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 RARAP10276 462 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 CCDC130P13994 396 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 CDK7P50613 346 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 MBTPS1Q14703 1052 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 ACAP1Q15027 740 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 WSCD1Q658N2 575 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 PMF1Q6P1K2 205 aa15.67■□□□□ 0.1
CCDC47-201ENST00000225726 TMEM110Q86TL2 294 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms