RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 RPGRIP1Q96KN7 1286 aa15.34■□□□□ 0.05
SUPT4H1-201ENST00000225504 KREMEN1Q96MU8 473 aa15.34■□□□□ 0.05
SUPT4H1-201ENST00000225504 PHF7Q9BWX1 381 aaPredicted RBP15.34■□□□□ 0.05
SUPT4H1-201ENST00000225504 NAT10Q9H0A0 1025 aaKnown RBP15.34■□□□□ 0.05
SUPT4H1-201ENST00000225504 WDR6Q9NNW5 1121 aaKnown RBP15.34■□□□□ 0.05
SUPT4H1-201ENST00000225504 TMEM30AQ9NV96 361 aa15.34■□□□□ 0.05
SUPT4H1-201ENST00000225504 HSFX1Q9UBD0 423 aa15.34■□□□□ 0.05
SUPT4H1-201ENST00000225504 XYLBO75191 536 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 PTPN2P17706 415 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 ACO1P21399 889 aaKnown RBP15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 PON1P27169 355 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 ALDH1A3P47895 512 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 RAD23BP54727 409 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 POTEHQ6S545 545 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 CYP26C1Q6V0L0 522 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 GBP6Q6ZN66 633 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 APTXQ7Z2E3 356 aaKnown RBP15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 DNAJB7Q7Z6W7 309 aaPredicted RBP15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 PPM1KQ8N3J5 372 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 ITFG1Q8TB96 612 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 ADAMTS19Q8TE59 1207 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 FAXDC2Q96IV6 333 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 ZNF512Q96ME7 567 aaPredicted RBP15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 CORO1BQ9BR76 489 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 LRRC3Q9BY71 257 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 ZNF518BQ9C0D4 1074 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 CBX8Q9HC52 389 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 SIX2Q9NPC8 291 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 GCNT4Q9P109 453 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 LIMA1Q9UHB6 759 aaKnown RBP15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 FAM50BQ9Y247 325 aa15.33■□□□□ 0.05
SUPT4H1-201ENST00000225504 RNF225M0QZC1 329 aaPredicted RBP15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 PES1O00541 588 aaKnown RBP15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 CALCAP01258 141 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 RHOP08100 348 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 POU2F2P09086 479 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 CCDC130P13994 396 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 CCR2P41597 374 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 EPHB3P54753 998 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 ZP2Q05996 745 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 MTMR3Q13615 1198 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 MAPRE1Q15691 268 aaKnown RBP15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 EXOC3L4Q17RC7 722 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 SLC5A9Q2M3M2 681 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 CFAP221Q4G0U5 840 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 TRIM65Q6PJ69 517 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 LUZP1Q86V48 1076 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 SCN4BQ8IWT1 228 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 FUKQ8N0W3 1084 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 SLC4A11Q8NBS3 891 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 TCEAL4Q96EI5 215 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 TNIP3Q96KP6 325 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 NECTIN4Q96NY8 510 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 NT5C1AQ9BXI3 368 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 ZNF334Q9HCZ1 680 aaPredicted RBP15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 ABCB6Q9NP58 842 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 UBE2TQ9NPD8 197 aaPredicted RBP15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 FAM49BQ9NUQ9 324 aa15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 AJAP1Q9UKB5 411 aaPredicted RBP15.33■□□□□ 0.04
SUPT4H1-201ENST00000225504 GTPBP10A4D1E9 387 aaKnown RBP15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 LRRC10BA6NIK2 292 aa15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 GJA1P17302 382 aa15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 CDK11BP21127 795 aaKnown RBP15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 MAGEA11P43364 429 aa15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 COPB1P53618 953 aaKnown RBP15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 PABPC1LQ4VXU2 614 aaKnown RBP15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 C4orf50Q6ZRC1 276 aa15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 ADHFE1Q8IWW8 467 aa15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 FUBP3Q96I24 572 aaKnown RBP eCLIP15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 HEXIM2Q96MH2 286 aaKnown RBP15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 MYADMQ96S97 322 aa15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 KCNK16Q96T55 309 aa15.32■□□□□ 0.04
SUPT4H1-201ENST00000225504 CLUHO75153 1309 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 C19orf67A6NJJ6 358 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 SMTNL1A8MU46 457 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 C2CD4DB7Z1M9 353 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 LOC730098B7Z3J9 87 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 MOSPD3O75425 235 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 BEST1O76090 585 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 MYL4P12829 197 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 HMGA1P17096 107 aaKnown RBP15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 FSHRP23945 695 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 PRSS36Q5K4E3 855 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 TMC8Q8IU68 726 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 ST13P5Q8NFI4 369 aaPredicted RBP15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 FAM200AQ8TCP9 573 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 SLC2A14Q8TDB8 520 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 ING5Q8WYH8 240 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 PSMG2Q969U7 264 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 CYFIP2Q96F07 1278 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 TMEM176AQ96HP8 235 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 MED10Q9BTT4 135 aa15.31■□□□□ 0.04
SUPT4H1-201ENST00000225504 PTPRDP23468 1912 aa15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 DENND4AQ7Z401 1863 aa15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 TBXAS1P24557 533 aaPredicted RBP15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 ADORA2BP29275 332 aa15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 GRIK1P39086 918 aa15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 KLK7P49862 253 aa15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 RPL10AP62906 217 aaKnown RBP15.3■□□□□ 0.04
SUPT4H1-201ENST00000225504 GCNT1Q02742 428 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms