RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CDHR1Q96JP9 859 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 ZWILCHQ9H900 591 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 ZNF302Q9NR11 478 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 AGTPBP1Q9UPW5 1226 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 FARP1Q9Y4F1 1045 aaPredicted RBP18.15■□□□□ 0.5
USB1-201ENST00000219281 WDR81Q562E7 1941 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 POLR2AP24928 1970 aaKnown RBP18.15■□□□□ 0.5
USB1-201ENST00000219281 DOCK5Q9H7D0 1870 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 PEX10O60683 326 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 CDC25CP30307 473 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 MYL6P60660 151 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 MTM1Q13496 603 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 MAPK6Q16659 721 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 SMTNL2Q2TAL5 461 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 PPP1R15BQ5SWA1 713 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 INPP5DQ92835 1189 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 TEX13BQ9BXU2 312 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 DHX33Q9H6R0 707 aaKnown RBP18.15■□□□□ 0.5
USB1-201ENST00000219281 PPCSQ9HAB8 311 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 NPHS2Q9NP85 383 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 CYLDQ9NQC7 956 aa18.15■□□□□ 0.5
USB1-201ENST00000219281 C3orf70A6NLC5 250 aaPredicted RBP18.14■□□□□ 0.49
USB1-201ENST00000219281 TTLL13PA6NNM8 815 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 LSM8O95777 96 aaKnown RBP18.14■□□□□ 0.49
USB1-201ENST00000219281 ASS1P00966 412 aaKnown RBP18.14■□□□□ 0.49
USB1-201ENST00000219281 OATP04181 439 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 ADRA1DP25100 572 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 OTUD4Q01804 1114 aaKnown RBP18.14■□□□□ 0.49
USB1-201ENST00000219281 RASA2Q15283 850 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 TAF1BQ53T94 588 aaPredicted RBP18.14■□□□□ 0.49
USB1-201ENST00000219281 PCGF5Q86SE9 256 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 ZBTB33Q86T24 672 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 FAM13CQ8NE31 585 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 CPT1BQ92523 772 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 TBC1D10AQ9BXI6 508 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 C12orf65Q9H3J6 166 aaKnown RBP18.14■□□□□ 0.49
USB1-201ENST00000219281 BATF3Q9NR55 127 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 CISHQ9NSE2 258 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 CEP83Q9Y592 693 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 PPP2R3BQ9Y5P8 575 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 NDC80O14777 642 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 ZWINTO95229 277 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 PAX7P23759 505 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 PHBP35232 272 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 KCNT1Q5JUK3 1230 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 C3orf62Q6ZUJ4 267 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 NLRP9Q7RTR0 991 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 RHPN2Q8IUC4 686 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 PPIL6Q8IXY8 311 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 ACTL9Q8TC94 416 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 SLC7A3Q8WY07 619 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 TFAP2BQ92481 460 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 MTMR12Q9C0I1 747 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 HOXC10Q9NYD6 342 aa18.14■□□□□ 0.49
USB1-201ENST00000219281 DDNO94850 711 aaPredicted RBP18.13■□□□□ 0.49
USB1-201ENST00000219281 WEE2P0C1S8 567 aa18.13■□□□□ 0.49
USB1-201ENST00000219281 EPHB2P29323 1055 aa18.13■□□□□ 0.49
USB1-201ENST00000219281 ARL4CP56559 192 aa18.13■□□□□ 0.49
USB1-201ENST00000219281 SEPT7Q16181 437 aaKnown RBP18.13■□□□□ 0.49
USB1-201ENST00000219281 GNPTABQ3T906 1256 aa18.13■□□□□ 0.49
USB1-201ENST00000219281 ATP11CQ8NB49 1132 aa18.13■□□□□ 0.49
USB1-201ENST00000219281 CNKSR2Q8WXI2 1034 aa18.13■□□□□ 0.49
USB1-201ENST00000219281 PAFAH2Q99487 392 aa18.13■□□□□ 0.49
USB1-201ENST00000219281 KLF6Q99612 283 aaPredicted RBP18.13■□□□□ 0.49
USB1-201ENST00000219281 ZFP69BQ9UJL9 534 aa18.13■□□□□ 0.49
USB1-201ENST00000219281 MAFBQ9Y5Q3 323 aaPredicted RBP18.13■□□□□ 0.49
USB1-201ENST00000219281 SNCAIPQ9Y6H5 919 aa18.13■□□□□ 0.49
USB1-201ENST00000219281 KIAA1217Q5T5P2 1943 aa18.13■□□□□ 0.49
USB1-201ENST00000219281 GOLGA8RI6L899 631 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 CST8O60676 142 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 PSMA2P25787 234 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 CCNG1P51959 295 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 TAP1Q03518 808 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 SH3D19Q5HYK7 790 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 FYB2Q5VWT5 728 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 ADGRD1Q6QNK2 874 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 SCARA5Q6ZMJ2 495 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 NIPA2Q8N8Q9 360 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 NAT8LQ8N9F0 302 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 FBXO36Q8NEA4 188 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 WDR83Q9BRX9 315 aaKnown RBP18.12■□□□□ 0.49
USB1-201ENST00000219281 ACAD9Q9H845 621 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 RNPEPL1Q9HAU8 725 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 SSU72Q9NP77 194 aaKnown RBP18.12■□□□□ 0.49
USB1-201ENST00000219281 TCRBV7S3A2A0A539 114 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 PEX11AO75192 247 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 GM2AP17900 193 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 RFC1P35251 1148 aaPredicted RBP18.12■□□□□ 0.49
USB1-201ENST00000219281 RPL22P35268 128 aaKnown RBP18.12■□□□□ 0.49
USB1-201ENST00000219281 FSTL1Q12841 308 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 OVGP1Q12889 678 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 VGLL4Q14135 290 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 PLEKHG4Q58EX7 1191 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 MTDHQ86UE4 582 aaKnown RBP18.12■□□□□ 0.49
USB1-201ENST00000219281 BRSK2Q8IWQ3 736 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 TCP10LQ8TDR4 215 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 TCHPQ9BT92 498 aa18.12■□□□□ 0.49
USB1-201ENST00000219281 ZMYND8Q9ULU4 1186 aaPredicted RBP18.12■□□□□ 0.49
USB1-201ENST00000219281 STAM2O75886 525 aa18.11■□□□□ 0.49
USB1-201ENST00000219281 GNAZP19086 355 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms