RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CYP26A1O43174 497 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 ECE2O60344 883 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 SOAT2O75908 522 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 EIF2AK2P19525 551 aaKnown RBP4.59□□□□□ -1.68
CHD9-201ENST00000219084 KLRC3Q07444 240 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 USP17L24Q0WX57 530 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 TTI2Q6NXR4 508 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 USP17L6PQ6QN14 398 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 PI16Q6UXB8 463 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 ARPINQ7Z6K5 226 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 LUZP2Q86TE4 346 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 TMPRSS6Q8IU80 811 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 BBS7Q8IWZ6 715 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 OLFM1Q99784 485 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 TEX13BQ9BXU2 312 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 THAP1Q9NVV9 213 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.59□□□□□ -1.68
CHD9-201ENST00000219084 PHTF1Q9UMS5 762 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 DDX60Q8IY21 1712 aaKnown RBP4.59□□□□□ -1.68
CHD9-201ENST00000219084 CYP2D7A0A087X1C5 515 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 RRN3P2A6NIE6 340 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 PHF20L1A8MW92 1017 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 F8VZ95 297 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 GOLGA8RI6L899 631 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 WDR47O94967 919 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 CTDNEP1O95476 244 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 HMOX2P30519 316 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 ENPEPQ07075 957 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 CUL2Q13617 745 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 DOK7Q18PE1 504 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 SCARA3Q6AZY7 606 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 MYLK4Q86YV6 388 aaPredicted RBP4.59□□□□□ -1.68
CHD9-201ENST00000219084 KIAA2013Q8IYS2 634 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 LRRC43Q8N309 656 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 RNF25Q96BH1 459 aaPredicted RBP4.59□□□□□ -1.68
CHD9-201ENST00000219084 ZBTB9Q96C00 473 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 THTPAQ9BU02 230 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 TJP2Q9UDY2 1190 aa4.59□□□□□ -1.68
CHD9-201ENST00000219084 A0A087WWV3 80 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 EVPLLA8MZ36 301 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 C5orf58C9J3I9 102 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 SLC25A27O95847 323 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 APBA3O96018 575 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ABL1P00519 1130 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 SREBF1P36956 1147 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 GRIK1P39086 918 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 NAMPTP43490 491 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 SARSP49591 514 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 CDK16Q00536 496 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 NFIAQ12857 509 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 SF3A3Q12874 501 aaKnown RBP eCLIP4.58□□□□□ -1.68
CHD9-201ENST00000219084 PTK2BQ14289 1009 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 BNC2Q6ZN30 1099 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 ERO1BQ86YB8 467 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 RYBPQ8N488 228 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 DCLK2Q8N568 766 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 CYGBQ8WWM9 190 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 FAM84BQ96KN1 310 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 ADNPQ9H2P0 1102 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 RAB6BQ9NRW1 208 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 KCNK4Q9NYG8 393 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 SIGLEC1Q9BZZ2 1709 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 IQCA1LA6NCM1 817 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 KRT87PA6NCN2 255 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ATP6V1G2O95670 118 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 RPS12P25398 132 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 ETFBP38117 255 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 SEL1L3Q68CR1 1132 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 SMYD5Q6GMV2 418 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TAF2Q6P1X5 1199 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TMC3Q7Z5M5 1100 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 GMCL1Q96IK5 515 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 PNKPQ96T60 521 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ZCCHC17Q9NP64 241 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 AVENQ9NQS1 362 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 RSL24D1Q9UHA3 163 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 FAM153AQ9UHL3 310 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ERI2A8K979 691 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 ZBBXA8MT70 800 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 EEF2KO00418 725 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 SULT1E1P49888 294 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 ZNF211Q13398 564 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 SLC12A1Q13621 1099 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 EMC2Q15006 297 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TRIP10Q15642 601 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TMCO4Q5TGY1 634 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 LRRC8DQ7L1W4 858 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 GPIHBP1Q8IV16 184 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 TAGAPQ8N103 731 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 CLEC4FQ8N1N0 589 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 SVOPQ8N4V2 548 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 STKLD1Q8NE28 680 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 SPATA33Q96N06 139 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 MMP19Q99542 508 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 BDH2Q9BUT1 245 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 RNF146Q9NTX7 359 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 DDX20Q9UHI6 824 aaKnown RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 CHMP2BQ9UQN3 213 aa4.58□□□□□ -1.68
CHD9-201ENST00000219084 KPNA4O00629 521 aaPredicted RBP4.58□□□□□ -1.68
CHD9-201ENST00000219084 PRKCBP05771 671 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms