RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 HMGB1P1B2RPK0 211 aaPredicted RBP31.29■■■□□ 2.6
PABPN1-201ENST00000216727 PI4K2BG5E9Z4 385 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 PMS2P54278 862 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 SLC25A11Q02978 314 aaKnown RBP31.29■■■□□ 2.6
PABPN1-201ENST00000216727 UBA3Q8TBC4 463 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 KLHL11Q9NVR0 708 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 NEU2Q9Y3R4 380 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 PIRO00625 290 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 XPOTO43592 962 aaKnown RBP31.29■■■□□ 2.6
PABPN1-201ENST00000216727 LRCH4O75427 683 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 KRT7P08729 469 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 C6orf222P0C671 652 aaPredicted RBP31.29■■■□□ 2.6
PABPN1-201ENST00000216727 MYZAPP0CAP1 466 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 CYBAP13498 195 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 CAPN2P17655 700 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 ITIH2P19823 946 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 EIF3BP55884 814 aaKnown RBP31.29■■■□□ 2.6
PABPN1-201ENST00000216727 ODF2Q5BJF6 829 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 ZFYVE27Q5T4F4 411 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 TXNRD3NBQ6F5E7 133 aa31.29■■■□□ 2.6
PABPN1-201ENST00000216727 DRICH1Q6PGQ1 229 aaPredicted RBP31.29■■■□□ 2.6
PABPN1-201ENST00000216727 SLMAPQ14BN4 828 aa31.28■■■□□ 2.6
PABPN1-201ENST00000216727 HADHQ16836 314 aaKnown RBP31.28■■■□□ 2.6
PABPN1-201ENST00000216727 TFDP3Q5H9I0 405 aa31.28■■■□□ 2.6
PABPN1-201ENST00000216727 EMC10Q5UCC4 262 aa31.28■■■□□ 2.6
PABPN1-201ENST00000216727 ARFGAP1Q8N6T3 406 aa31.28■■■□□ 2.6
PABPN1-201ENST00000216727 MTG1Q9BT17 334 aaPredicted RBP31.28■■■□□ 2.6
PABPN1-201ENST00000216727 APOL6Q9BWW8 343 aa31.28■■■□□ 2.6
PABPN1-201ENST00000216727 ASIC3Q9UHC3 531 aa31.28■■■□□ 2.6
PABPN1-201ENST00000216727 MYADML2A6NDP7 307 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 NUDT17P0C025 328 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 IVDP26440 423 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 DPH6Q7L8W6 267 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 C12orf29Q8N999 325 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 OR2W6PQ8NHA6 318 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 RAPGEF5Q92565 580 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 EPB41L4BQ9H329 900 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 EFR3BQ9Y2G0 817 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 hCG_1818297A0A087WSY0 165 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 PFKMP08237 780 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 CDKN2BP42772 138 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 FCGRTP55899 365 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 PKDCCQ504Y2 493 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 SNF8Q96H20 258 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 CCDC114Q96M63 670 aa31.27■■■□□ 2.6
PABPN1-201ENST00000216727 TP73O15350 636 aa31.26■■■□□ 2.59
PABPN1-201ENST00000216727 SHOX2O60902 331 aaPredicted RBP31.26■■■□□ 2.59
PABPN1-201ENST00000216727 SETSIPP0DME0 302 aa31.26■■■□□ 2.59
PABPN1-201ENST00000216727 KRT10P13645 584 aa31.26■■■□□ 2.59
PABPN1-201ENST00000216727 LMNB2Q03252 620 aa31.26■■■□□ 2.59
PABPN1-201ENST00000216727 ADCY2Q08462 1091 aa31.26■■■□□ 2.59
PABPN1-201ENST00000216727 FBXO47Q5MNV8 452 aa31.26■■■□□ 2.59
PABPN1-201ENST00000216727 MFSD14CQ5VZR4 134 aa31.26■■■□□ 2.59
PABPN1-201ENST00000216727 KCTD16Q68DU8 428 aa31.26■■■□□ 2.59
PABPN1-201ENST00000216727 IPPQ9Y573 584 aa31.26■■■□□ 2.59
PABPN1-201ENST00000216727 PNPLA4P41247 253 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 SKOR1P84550 965 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 SOWAHAQ2M3V2 549 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 GOLGA7BQ2TAP0 167 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 GNASQ5JWF2 1037 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 PPP1R26Q5T8A7 1209 aaPredicted RBP31.25■■■□□ 2.59
PABPN1-201ENST00000216727 EMC1Q8N766 993 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 ZNF560Q96MR9 790 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 RNF39Q9H2S5 420 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 GDAP2Q9NXN4 497 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 LRRD1A4D1F6 860 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 RARGP13631 454 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 CAV1Q03135 178 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 FAM102AQ5T9C2 384 aaPredicted RBP31.25■■■□□ 2.59
PABPN1-201ENST00000216727 RHBDF2Q6PJF5 856 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 ACOT1Q86TX2 421 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 CCDC89Q8N998 374 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 UPF3AQ9H1J1 476 aaKnown RBP31.25■■■□□ 2.59
PABPN1-201ENST00000216727 GTF2IRD1Q9UHL9 959 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 NME7Q9Y5B8 376 aa31.25■■■□□ 2.59
PABPN1-201ENST00000216727 C3orf70A6NLC5 250 aaPredicted RBP31.24■■■□□ 2.59
PABPN1-201ENST00000216727 LIASO43766 372 aa31.24■■■□□ 2.59
PABPN1-201ENST00000216727 KAZNQ674X7 775 aa31.24■■■□□ 2.59
PABPN1-201ENST00000216727 SH2D3CQ8N5H7 860 aa31.24■■■□□ 2.59
PABPN1-201ENST00000216727 SMG8Q8ND04 991 aaKnown RBP31.24■■■□□ 2.59
PABPN1-201ENST00000216727 KLK14Q9P0G3 267 aa31.24■■■□□ 2.59
PABPN1-201ENST00000216727 SCN10AQ9Y5Y9 1956 aa31.24■■■□□ 2.59
PABPN1-201ENST00000216727 IL1R2P27930 398 aa31.24■■■□□ 2.59
PABPN1-201ENST00000216727 ZNF143P52747 638 aaPredicted RBP31.24■■■□□ 2.59
PABPN1-201ENST00000216727 NKX3-2P78367 333 aa31.24■■■□□ 2.59
PABPN1-201ENST00000216727 ARHGAP17Q68EM7 881 aa31.24■■■□□ 2.59
PABPN1-201ENST00000216727 FAM228AQ86W67 206 aa31.24■■■□□ 2.59
PABPN1-201ENST00000216727 TRIB2Q92519 343 aa31.24■■■□□ 2.59
PABPN1-201ENST00000216727 TSPYL1Q9H0U9 437 aa31.24■■■□□ 2.59
PABPN1-201ENST00000216727 A6NNZ2 444 aa31.23■■■□□ 2.59
PABPN1-201ENST00000216727 E5RJQ4 531 aa31.23■■■□□ 2.59
PABPN1-201ENST00000216727 ATF2P15336 505 aa31.23■■■□□ 2.59
PABPN1-201ENST00000216727 PSMC4P43686 418 aa31.23■■■□□ 2.59
PABPN1-201ENST00000216727 MRPS6P82932 125 aaKnown RBP31.23■■■□□ 2.59
PABPN1-201ENST00000216727 TAZQ16635 292 aa31.23■■■□□ 2.59
PABPN1-201ENST00000216727 TUBB8Q3ZCM7 444 aa31.23■■■□□ 2.59
PABPN1-201ENST00000216727 ZNF365Q70YC5 407 aa31.23■■■□□ 2.59
PABPN1-201ENST00000216727 ASNSD1Q9NWL6 643 aa31.23■■■□□ 2.59
PABPN1-201ENST00000216727 KPNA7A9QM74 516 aa31.22■■■□□ 2.59
PABPN1-201ENST00000216727 RNF8O76064 485 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms