RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 CXorf40BQ96DE9 158 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 PAGE5Q96GU1 130 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 SIKE1Q9BRV8 207 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 C17orf80Q9BSJ5 609 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ZDHHC4Q9NPG8 344 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ZNF232Q9UNY5 417 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 NFIBO00712 420 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 DDX3YO15523 660 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 KIF1CO43896 1103 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 SIN3BO75182 1162 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 EIF2S3P41091 472 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 SP3Q02447 781 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 PAN2Q504Q3 1202 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 IKBIPQ70UQ0 350 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 NEDD1Q8NHV4 660 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 TTC7AQ9ULT0 858 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 ATP5BP06576 529 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 FGFR2P21802 821 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 FEN1P39748 380 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 PNPLA4P41247 253 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 IST1P53990 364 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ATP12AP54707 1039 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 GRAMD1BQ3KR37 738 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 PPP1R15BQ5SWA1 713 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 SPATA21Q7Z572 469 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CCDC197Q8NCU1 140 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 SSH1Q8WYL5 1049 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 VIPAS39Q9H9C1 493 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 PCDHB3Q9Y5E6 796 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CYP2C9P11712 490 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 VARSP26640 1264 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 RPL9P32969 192 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 TALDO1P37837 337 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 GUCY2FP51841 1108 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 POU4F1Q01851 419 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 MORC3Q14149 939 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 HSDL1Q3SXM5 330 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ARHGEF19Q8IW93 802 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 RHOT2Q8IXI1 618 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 GPR135Q8IZ08 494 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 FBXO22Q8NEZ5 403 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ACE2Q9BYF1 805 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 SAP130Q9H0E3 1048 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 RHPN2P1A8MT19 583 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 STRNO43815 780 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 RHOBTB1O94844 696 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 STIP1P31948 543 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 PEX3P56589 373 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 C6orf10Q5SRN2 563 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ALKBH5Q6P6C2 394 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 DEPDC4Q8N2C3 294 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 KLHL23Q8NBE8 558 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 KLHL29Q96CT2 875 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.58□□□□□ -1.84
NEB-201ENST00000172853 PPP1R14DQ9NXH3 145 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 TBC1D3BA6NDS4 549 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 H0Y3Z8 333 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 FGF19O95750 216 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CHRM3P20309 590 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 RERGQ96A58 199 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 BLZF1Q9H2G9 400 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CAB39LQ9H9S4 337 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 POLR1BQ9H9Y6 1135 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 FKBP14Q9NWM8 211 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 N6AMT1Q9Y5N5 214 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 MMP10P09238 476 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 SESN2P58004 480 aaPredicted RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 DUOXA2Q1HG44 320 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 EPHX4Q8IUS5 362 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 TTLL11Q8NHH1 800 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 RP9Q8TA86 221 aaKnown RBP3.58□□□□□ -1.84
NEB-201ENST00000172853 MIEF1Q9NQG6 463 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 CDC23Q9UJX2 597 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 ANAPC7Q9UJX3 599 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 GRIN2AQ12879 1464 aa3.58□□□□□ -1.84
NEB-201ENST00000172853 PHF2O75151 1096 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 RPIAP49247 311 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 PSMD4P55036 377 aaKnown RBP3.57□□□□□ -1.84
NEB-201ENST00000172853 EN1Q05925 392 aaPredicted RBP3.57□□□□□ -1.84
NEB-201ENST00000172853 NDUFAF6Q330K2 333 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 CDR2LQ86X02 465 aaPredicted RBP3.57□□□□□ -1.84
NEB-201ENST00000172853 PCYOX1LQ8NBM8 494 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 SHDQ96IW2 340 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 CDADC1Q9BWV3 514 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 RAD21L1Q9H4I0 556 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 SLC32A1Q9H598 525 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 SLC39A2Q9NP94 309 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 ADAM22Q9P0K1 906 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 AXIN2Q9Y2T1 843 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 RNF103O00237 685 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 MTHFD1P11586 935 aaKnown RBP3.57□□□□□ -1.84
NEB-201ENST00000172853 GARTP22102 1010 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 ENOSF1Q7L5Y1 443 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 TRPV3Q8NET8 790 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 OR8K1Q8NGG5 319 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 USP6NLQ92738 828 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 NKIRAS2Q9NYR9 191 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 ZNF229Q9UJW7 825 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 MYO5CQ9NQX4 1742 aa3.57□□□□□ -1.84
NEB-201ENST00000172853 SCGNO76038 276 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms