RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Ago4Q8CJF8 861 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Nr3c2Q8VII8 978 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 RerglB2RVE2 204 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Serpina3kP07759 418 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Pgk2P09041 417 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 ItgadQ3V0T4 1168 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Runx1t1Q61909 577 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Zcchc2Q69ZB8 1166 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Lrig3Q6P1C6 1117 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Rundc3bQ6PDC0 408 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Tmem39bQ810L4 492 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Vps11Q91W86 941 aaKnown RBP10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Atpaf2Q91YY4 289 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 MkksQ9JI70 570 aa10.22□□□□□ -0.77
Syne1-201ENSMUST00000041639 Il1rl1P14719 567 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Pstpip1P97814 415 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Lcp1Q61233 627 aaKnown RBP10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 WhrnQ80VW5 918 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Zfp398Q8BV16 643 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Tp53bp2Q8CG79 1128 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Fcho1Q8K285 873 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ahi1Q8K3E5 1047 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Pcdha5Q91Y15 934 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Pdxdc1Q99K01 787 aaKnown RBP10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Slc5a4aQ9ET37 656 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Uts2Q9QZQ3 123 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ifit3bE9PV48 403 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Cdc25cP48967 447 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 rp9P97762 213 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ttc39dQ0VF76 604 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Oas1fQ14AZ4 364 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 McuQ3UMR5 350 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 CttnQ60598 546 aaKnown RBP10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 MyripQ8K3I4 856 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Pcyox1Q9CQF9 505 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Cib4Q9D9N5 185 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Nphs1Q9QZS7 1256 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Ap4b1Q9WV76 738 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Osbpl10S4R1M9 766 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Dip2aQ8BWT5 1523 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Pnldc1B2RXZ1 531 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 MafgO54790 162 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 SnrpfP62307 86 aaKnown RBP10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 NfibP97863 570 aaKnown RBP10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 GsapQ3TCV3 858 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Slitrk3Q810B9 980 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Elp3Q9CZX0 547 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Entpd5Q9WUZ9 427 aa10.21□□□□□ -0.77
Syne1-201ENSMUST00000041639 Arhgef37A1IGU4 676 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Arid5aQ3U108 590 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Rrp36Q3UFY0 244 aaKnown RBP10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Trappc3lQ4KL14 181 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Atg9bQ6EBV9 922 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Dna2Q6ZQJ5 1062 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Olfr670Q7TRP3 312 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 ThtpaQ8JZL3 224 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Terb2Q9D494 218 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Stk25Q9Z2W1 426 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ceacam5Q3UKK2 947 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Sema5aQ62217 1077 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Guca1bQ8VBV8 201 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Slxl1Q9D515 155 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ten1Q9D7K2 161 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ybx3Q9JKB3 361 aaKnown RBP10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Sept5Q9Z2Q6 369 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Abca6Q8K441 1624 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 JcadQ5DTX6 1320 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Apba3O88888 571 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 AdssP46664 456 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 PoliQ6R3M4 717 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Them6Q80ZW2 207 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Dusp4Q8BFV3 398 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Dennd2aQ8C4S8 1000 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Sumf1Q8R0F3 372 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Anapc4Q91W96 807 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Trim12aQ99PQ1 284 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Trmt11Q9CWH5 460 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 Slc26a4Q9R155 780 aa10.21□□□□□ -0.78
Syne1-201ENSMUST00000041639 SynrgQ5SV85 1306 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Klhl18A0A0G2JGN5 579 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Wdr72D3YYM4 1114 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gm8267E9Q207 261 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ets2P15037 468 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cyp2d10P24456 504 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 BtkP35991 659 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Traf2P39429 501 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cnot7Q60809 285 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Olfr8Q60892 310 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ddhd1Q80YA3 547 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 NcaphQ8C156 731 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Dedd2Q8QZV0 330 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 FopnlQ9CZS3 174 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tmed10Q9D1D4 219 aaKnown RBP10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Polr3hQ9D2C6 204 aaKnown RBP10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Sept12Q9D451 317 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tspan3Q9QY33 253 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tgm2P21981 686 aaKnown RBP10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cap1P40124 474 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 YdjcQ14BV6 310 aa10.2□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tcf12Q61286 706 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms