RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 TraddQ3U0V2 310 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Rmdn3Q3UJU9 470 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Sema5aQ62217 1077 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gpc5Q8CAL5 572 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Serpinb13Q8CDC0 389 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Ago2Q8CJG0 860 aaKnown RBP13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 OtoaQ8K561 1137 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Slf1Q8R3P9 1054 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 MgarpQ8VI64 283 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Q9CQC3 228 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Fam212aQ9CX62 282 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Krt17Q9QWL7 433 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Klrc2Q9WTJ9 238 aa13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gys1Q9Z1E4 738 aaKnown RBP13.97□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gm27029A2A4P4 543 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 R3hdm4Q4VBF2 262 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 RilpQ5ND29 369 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Ppp1r14bQ62084 147 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 HpseQ6YGZ1 535 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 AgpsQ8C0I1 645 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Tmco1Q921L3 188 aaKnown RBP13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Polr3fQ921X6 316 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Med7Q9CZB6 233 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Ddx56Q9D0R4 546 aaKnown RBP13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Drc3Q9D5E4 523 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Capn12Q9ER56 720 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Ropn1Q9ESG2 212 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 IdeQ9JHR7 1019 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Pdzd4Q9QY39 772 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Zfp236S4R299 1847 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Atxn10P28658 475 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Arpc4P59999 168 aaKnown RBP13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Ppp1r12cQ3UMT1 782 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Elf3Q3UPW2 391 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Slc26a2Q62273 739 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Jade3Q6IE82 823 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Siglec10Q80ZE3 688 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Aldh5a1Q8BWF0 523 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Commd10Q8JZY2 202 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Cdk5rap3Q99LM2 503 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Ndufb5Q9CQH3 189 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Slc25a11Q9CR62 314 aaKnown RBP13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Gtf2ird1Q9JI57 1104 aaKnown RBP13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Il20Q9JKV9 176 aa13.96□□□□□ -0.17
Prpf38b-201ENSMUST00000029480 Zfp626A0A0U1RQ84 676 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Clk4O35493 481 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Nptx2O70340 429 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Zbtb48Q1H9T6 681 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 InscQ3HNM7 579 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Tfcp2l1Q3UNW5 479 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 MaeaQ4VC33 396 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Tmcc1Q69ZZ6 649 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Tmc8Q7TN58 722 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Ankfy1Q810B6 1169 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Creb3l2Q8BH52 521 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Dnali1Q8BVN8 258 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Nmrk1Q91W63 195 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 HgsQ99LI8 775 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Snx10Q9CWT3 201 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Tsc1Q9EP53 1161 aa13.96□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Zfp715G3X9T1 886 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Aff1O88573 1216 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Serpinb2P12388 415 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Fam160a1Q505K2 1081 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Sema5bQ60519 1093 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 XiapQ60989 496 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 TwistnbQ78WZ7 330 aaKnown RBP13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Dnm1lQ8K1M6 742 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Dnajc9Q91WN1 259 aaKnown RBP13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Mov10l1Q99MV5 1187 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Snx24Q9CRB0 169 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Lrrc34Q9DAM1 415 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Gm28360A0A087WR25 190 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Tex13c2A0A0G2JGA3 530 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Ccdc144bE9PVZ3 520 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 SmgcF6VRN1 385 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Psmc4P54775 418 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Casp4P70343 373 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Otud5Q3U2S4 566 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Znf12Q7TSI0 686 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Ugp2Q91ZJ5 508 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Igdcc4Q9EQS9 1252 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Slc22a3Q9WTW5 551 aa13.95□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 DohhA0A1Y7VJ29 135 aa13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Ppef1O35655 650 aa13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Birc2Q62210 612 aa13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Krt12Q64291 487 aa13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Psd2Q6P1I6 770 aa13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 MogsQ80UM7 834 aaKnown RBP13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Pgrmc2Q80UU9 217 aaKnown RBP13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Slc45a1Q8BIV7 751 aa13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Polr2bQ8CFI7 1174 aaKnown RBP13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Evi2bQ8VD58 444 aa13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Rin1Q921Q7 763 aa13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Traf7Q922B6 594 aa13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 CmasQ99KK2 432 aaKnown RBP13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Mrps22Q9CXW2 359 aa13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Nsmce1Q9D720 266 aa13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 SrcapA0A087WQ44 3271 aa13.94□□□□□ -0.18
Prpf38b-201ENSMUST00000029480 Zbtb11G5E8B9 1050 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms