RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Stam2O88811 523 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 SarsP26638 512 aaKnown RBP17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Phactr4Q501J7 694 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Homer3Q99JP6 356 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 GrapQ9CX99 217 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Habp4Q9JKS5 411 aaKnown RBP17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Gm13084A2A8N0 494 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Kbtbd2G3X9X1 623 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Orc4O88708 433 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 ThraP63058 492 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Ece1Q4PZA2 769 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Ifi47Q61635 420 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Pla2g4cQ64GA5 597 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Kbtbd13Q8C828 458 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Prpsap1Q9D0M1 356 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Tmem131lQ3U3D7 1597 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Fam193bQ3U2K0 892 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Ppp4r4Q8C0Y0 875 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 PyglQ9ET01 850 aa17.38■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Lrrc63A6H694 637 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Skint6A7XUZ6 1240 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Hcn2O88703 863 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Gm4981Q3ULJ8 291 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 9930111J21Rik1Q5SVP0 844 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Tbx2Q60707 711 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Gtse1Q8R080 741 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Polr3fQ921X6 316 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Slc5a5Q99PN0 618 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Lrrc34Q9DAM1 415 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Cyp2s1Q9DBX6 501 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Prim2P33610 505 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Sox6P40645 827 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Epb41P48193 858 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Sec23aQ01405 765 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Cog4Q8R1U1 785 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Apobec3Q99J72 440 aaKnown RBP17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Pdxdc1Q99K01 787 aaKnown RBP17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Ttc30bQ9CY00 664 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Sgf29Q9DA08 293 aaKnown RBP17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Tlr9Q9EQU3 1032 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 QkiQ9QYS9 341 aaKnown RBP17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 CdylQ9WTK2 593 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Btbd18A0A0A6YY25 723 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 ErfP70459 551 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Ipo11Q8K2V6 975 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Slc44a4Q91VA1 707 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Krt6bQ9Z331 562 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Kif1aP33173 1695 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Zyg11aA2BFL2 627 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Clhc1Q5M6W3 596 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Znf12Q7TSI0 686 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 CtsqQ91ZF4 343 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 MydgfQ9CPT4 166 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Tmod3Q9JHJ0 352 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 A530032D15RikE9Q422 215 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Smad1P70340 465 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Bend6Q6PFX2 281 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Scgb2b2Q6UGQ3 114 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Dnph1Q80VJ3 173 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 PlekQ9JHK5 350 aaKnown RBP17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Psmd10Q9Z2X2 231 aa17.37■□□□□ 0.37
Col17a1-201ENSMUST00000026045 4930469K13RikA0A286YDB2 92 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Gm20509G3UZF1 325 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Gm17019K7N6W5 255 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Q3UJP5 209 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Atp6v1g3Q8BMC1 118 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Rabl3Q9D4V7 236 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 1700123K08RikQ9D991 295 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Hmox2O70252 315 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Pola2P33611 600 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Ush1gQ80T11 461 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Vmn1r213Q8R278 384 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Scrn2Q8VCA8 425 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Dppa5aQ9CQS7 118 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Tmem68Q9D850 329 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Fxr2Q9WVR4 673 aaKnown RBP17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 H2-EaP01904 255 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 P04224 255 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Map4k1P70218 827 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Ccdc69Q3TCJ8 202 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Rasip1Q3U0S6 961 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Tmc4Q7TQ65 694 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Unc5bQ8K1S3 945 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Atp5f1Q9CQQ7 256 aaKnown RBP17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 YwhabQ9CQV8 246 aaKnown RBP17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Serpinb9bQ9DAV6 377 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Gm5478D3Z6R0 159 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Ripk2P58801 539 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Grid1Q61627 1009 aa17.36■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Ankle1A8VU90 534 aa17.35■□□□□ 0.37
Col17a1-201ENSMUST00000026045 PlaaP27612 794 aa17.35■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Vps4bP46467 444 aaKnown RBP17.35■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Pon1P52430 355 aa17.35■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Slc9c1Q6UJY2 1175 aa17.35■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Ints2Q80UK8 1198 aa17.35■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Luzp2Q8BGY3 345 aa17.35■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Cdk17Q8K0D0 523 aa17.35■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Iqsec1Q8R0S2 961 aa17.35■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Ube2sQ921J4 223 aa17.35■□□□□ 0.37
Col17a1-201ENSMUST00000026045 Txndc12Q9CQU0 170 aa17.35■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms