RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W FMP41P53889 259 aaKnown RBP1.19□□□□□ -2.22
TRM3YDL112W MRS4P23500 304 aa1.19□□□□□ -2.22
TRM3YDL112W SIM1P40472 476 aa1.19□□□□□ -2.22
TRM3YDL112W CDC7P06243 507 aa1.19□□□□□ -2.22
TRM3YDL112W CPT1P17898 393 aa1.19□□□□□ -2.22
TRM3YDL112W RPL24BP24000 155 aaKnown RBP1.19□□□□□ -2.22
TRM3YDL112W UTP11P34247 250 aaPredicted RBP1.19□□□□□ -2.22
TRM3YDL112W LST7P53237 242 aa1.19□□□□□ -2.22
TRM3YDL112W IRC23Q08416 157 aa1.19□□□□□ -2.22
TRM3YDL112W ATG5Q12380 294 aa1.19□□□□□ -2.22
TRM3YDL112W YHR213W-AQ8TGT4 77 aa1.19□□□□□ -2.22
TRM3YDL112W TAL1P15019 335 aaKnown RBP1.18□□□□□ -2.22
TRM3YDL112W SUA5P32579 426 aa1.18□□□□□ -2.22
TRM3YDL112W PET100P38958 111 aa1.18□□□□□ -2.22
TRM3YDL112W MCM22P47167 239 aa1.18□□□□□ -2.22
TRM3YDL112W GPI15P53961 229 aa1.18□□□□□ -2.22
TRM3YDL112W MRX11Q03079 207 aa1.18□□□□□ -2.22
TRM3YDL112W TRP1P00912 224 aa1.18□□□□□ -2.22
TRM3YDL112W SFT2P38166 215 aa1.18□□□□□ -2.22
TRM3YDL112W YHR022CP38763 256 aa1.18□□□□□ -2.22
TRM3YDL112W YHR122WP38829 231 aa1.18□□□□□ -2.22
TRM3YDL112W IRC22P40006 225 aa1.18□□□□□ -2.22
TRM3YDL112W SER2P42941 309 aa1.18□□□□□ -2.22
TRM3YDL112W TIM21P53220 239 aa1.18□□□□□ -2.22
TRM3YDL112W PDR17P53844 350 aa1.18□□□□□ -2.22
TRM3YDL112W DYN2Q02647 92 aa1.18□□□□□ -2.22
TRM3YDL112W PPT2Q12036 173 aa1.18□□□□□ -2.22
TRM3YDL112W PAA1Q12447 191 aaKnown RBP1.18□□□□□ -2.22
TRM3YDL112W PRM4Q12498 284 aa1.18□□□□□ -2.22
TRM3YDL112W SPS2P08459 502 aa1.18□□□□□ -2.22
TRM3YDL112W YGR269WP40326 108 aa1.18□□□□□ -2.22
TRM3YDL112W BRP1P53194 125 aa1.18□□□□□ -2.22
TRM3YDL112W CAF40P53829 373 aa1.18□□□□□ -2.22
TRM3YDL112W UBC7Q02159 165 aa1.18□□□□□ -2.22
TRM3YDL112W YMR082CQ04276 118 aa1.18□□□□□ -2.22
TRM3YDL112W YPR010C-AA5Z2X5 72 aa1.17□□□□□ -2.22
TRM3YDL112W YBL059WP34224 193 aa1.17□□□□□ -2.22
TRM3YDL112W MRPL4P36517 319 aa1.17□□□□□ -2.22
TRM3YDL112W HPA3P39979 161 aa1.17□□□□□ -2.22
TRM3YDL112W MIC27P50945 234 aa1.17□□□□□ -2.22
TRM3YDL112W VPS28Q02767 242 aa1.17□□□□□ -2.22
TRM3YDL112W QCR9P22289 66 aa1.17□□□□□ -2.22
TRM3YDL112W YER135CP40082 130 aa1.17□□□□□ -2.22
TRM3YDL112W YGL185CP53100 379 aa1.17□□□□□ -2.22
TRM3YDL112W YDR366CP87287 132 aa1.17□□□□□ -2.22
TRM3YDL112W YMR181CQ03231 154 aa1.17□□□□□ -2.22
TRM3YDL112W YMR253CQ04835 414 aa1.17□□□□□ -2.22
TRM3YDL112W AIM45Q12480 344 aaKnown RBP1.17□□□□□ -2.22
TRM3YDL112W HTB2P02294 131 aa1.17□□□□□ -2.22
TRM3YDL112W MRS1P07266 363 aa1.17□□□□□ -2.22
TRM3YDL112W LCB3P47013 409 aa1.17□□□□□ -2.22
TRM3YDL112W ERI1P62651 68 aaKnown RBP1.17□□□□□ -2.22
TRM3YDL112W YMR090WQ04304 227 aaKnown RBP1.17□□□□□ -2.22
TRM3YDL112W PBA1Q05778 276 aa1.17□□□□□ -2.22
TRM3YDL112W COA4Q05809 96 aa1.17□□□□□ -2.22
TRM3YDL112W YOL160WQ08321 113 aa1.17□□□□□ -2.22
TRM3YDL112W HTZ1Q12692 134 aaKnown RBP1.17□□□□□ -2.22
TRM3YDL112W COA2Q3E823 68 aa1.17□□□□□ -2.22
TRM3YDL112W YBR013CP38215 129 aa1.16□□□□□ -2.22
TRM3YDL112W IPI1P38803 334 aaPredicted RBP1.16□□□□□ -2.22
TRM3YDL112W YEA6P39953 335 aa1.16□□□□□ -2.22
TRM3YDL112W YPS5P53057 165 aa1.16□□□□□ -2.22
TRM3YDL112W PEX27Q08580 376 aa1.16□□□□□ -2.22
TRM3YDL112W PRR2Q12310 699 aa1.16□□□□□ -2.22
TRM3YDL112W IES3Q12345 250 aa1.16□□□□□ -2.22
TRM3YDL112W YMR230W-AQ3E7B5 62 aa1.16□□□□□ -2.22
TRM3YDL112W YLR342W-AQ3E810 57 aa1.16□□□□□ -2.22
TRM3YDL112W SEC22P22214 214 aa1.16□□□□□ -2.22
TRM3YDL112W MST28P39552 234 aa1.16□□□□□ -2.22
TRM3YDL112W MST27P53176 234 aa1.16□□□□□ -2.22
TRM3YDL112W YOR011W-AQ3E807 68 aa1.16□□□□□ -2.22
TRM3YDL112W YCL021W-AQ96VH3 125 aa1.16□□□□□ -2.22
TRM3YDL112W TPI1P00942 248 aaKnown RBP1.16□□□□□ -2.22
TRM3YDL112W STF1P01098 86 aa1.16□□□□□ -2.22
TRM3YDL112W YEA4P40004 342 aa1.16□□□□□ -2.22
TRM3YDL112W TMA23Q03525 211 aa1.16□□□□□ -2.22
TRM3YDL112W ERP1Q05359 219 aaKnown RBP1.16□□□□□ -2.22
TRM3YDL112W POC4Q12245 148 aaPredicted RBP1.16□□□□□ -2.22
TRM3YDL112W PRM7Q12459 698 aa1.16□□□□□ -2.22
TRM3YDL112W DFM1Q12743 341 aaKnown RBP1.16□□□□□ -2.22
TRM3YDL112W YLL066W-BQ8TGJ7 56 aa1.16□□□□□ -2.22
TRM3YDL112W RPL12AP0CX53 165 aaKnown RBP1.16□□□□□ -2.22
TRM3YDL112W RPL12BP0CX54 165 aa1.16□□□□□ -2.22
TRM3YDL112W AME1P38313 324 aa1.16□□□□□ -2.22
TRM3YDL112W YBR242WP38331 238 aa1.16□□□□□ -2.22
TRM3YDL112W PRE5P40302 234 aaKnown RBP1.16□□□□□ -2.22
TRM3YDL112W YIR035CP40579 254 aa1.16□□□□□ -2.22
TRM3YDL112W HAM1P47119 197 aaKnown RBP1.16□□□□□ -2.22
TRM3YDL112W MRPL50P53724 139 aa1.16□□□□□ -2.22
TRM3YDL112W MGR3Q04472 501 aa1.16□□□□□ -2.22
TRM3YDL112W SHH3Q04487 196 aa1.16□□□□□ -2.22
TRM3YDL112W RTC6O14464 93 aa1.15□□□□□ -2.22
TRM3YDL112W RPL33AP05744 107 aaKnown RBP1.15□□□□□ -2.22
TRM3YDL112W RPS25BP0C0T4 108 aaKnown RBP1.15□□□□□ -2.22
TRM3YDL112W URA5P13298 226 aaKnown RBP1.15□□□□□ -2.22
TRM3YDL112W FCY2P17064 533 aa1.15□□□□□ -2.22
TRM3YDL112W COS8P38723 381 aa1.15□□□□□ -2.22
TRM3YDL112W RRF1P38771 230 aa1.15□□□□□ -2.22
TRM3YDL112W RPL33BP41056 107 aaKnown RBP1.15□□□□□ -2.22
TRM3YDL112W DSK2P48510 373 aa1.15□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms