RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 SNX16P57768 344 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 ORC1Q13415 861 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 FNDC1Q4ZHG4 1894 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-218ENST00000641491 RTP2Q5QGT7 225 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 PPP1R2P3Q6NXS1 205 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 PRSS55Q6UWB4 352 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-218ENST00000641491 ZNF677Q86XU0 584 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 GLYCTKQ8IVS8 523 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 GPR65Q8IYL9 337 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 CCDC112Q8NEF3 446 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 GDPD5Q8WTR4 605 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 C2orf15Q8WU43 125 aaKnown RBP13.77□□□□□ -0.21
PHGDH-218ENST00000641491 KBTBD7Q8WVZ9 684 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 ATXN2LQ8WWM7 1075 aaKnown RBP13.77□□□□□ -0.21
PHGDH-218ENST00000641491 SYN2Q92777 582 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-218ENST00000641491 TRIM44Q96DX7 344 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-218ENST00000641491 B3GALT6Q96L58 329 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 NAA15Q9BXJ9 866 aaKnown RBP13.77□□□□□ -0.21
PHGDH-218ENST00000641491 ZBP1Q9H171 429 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 SYNCQ9H7C4 482 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 ABI2Q9NYB9 513 aaPredicted RBP13.77□□□□□ -0.21
PHGDH-218ENST00000641491 PCDHB5Q9Y5E4 795 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 BACE2Q9Y5Z0 518 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 CDY1Q9Y6F8 540 aa13.77□□□□□ -0.21
PHGDH-218ENST00000641491 MYO9BQ13459 2157 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 PDCD11Q14690 1871 aaKnown RBP13.76□□□□□ -0.21
PHGDH-218ENST00000641491 M0QYV0 167 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 FAM200BP0CF97 657 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 PTPN1P18031 435 aaKnown RBP13.76□□□□□ -0.21
PHGDH-218ENST00000641491 TNFAIP3P21580 790 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 ADORA2BP29275 332 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 HOXD11P31277 338 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-218ENST00000641491 JAM2P57087 298 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 GRIN2CQ14957 1233 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 TAF12Q16514 161 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 LIN9Q5TKA1 542 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 TAF3Q5VWG9 929 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 CYP26C1Q6V0L0 522 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 GPIHBP1Q8IV16 184 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 FAM71AQ8IYT1 594 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 TXLNBQ8N3L3 684 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 CCDC42Q96M95 316 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 GAS2L1Q99501 681 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-218ENST00000641491 ELOVL4Q9GZR5 314 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 SDCBP2Q9H190 292 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 ZNF576Q9H609 170 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 FAM49BQ9NUQ9 324 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 MTRRQ9UBK8 725 aa13.76□□□□□ -0.21
PHGDH-218ENST00000641491 PRRG1O14668 218 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 GABRDO14764 452 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 AKR1B10O60218 316 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 PNMA6AP0CW24 399 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-218ENST00000641491 CYP11B1P15538 503 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 ACO1P21399 889 aaKnown RBP13.75□□□□□ -0.21
PHGDH-218ENST00000641491 OR1D2P34982 312 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 CYLC1P35663 651 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-218ENST00000641491 RAD23BP54727 409 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 PLD1Q13393 1074 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 PTPN14Q15678 1187 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 GOLGA7BQ2TAP0 167 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 CD300LGQ6UXG3 332 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 TRIM72Q6ZMU5 477 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 TAS1R1Q7RTX1 841 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 CCDC186Q7Z3E2 898 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 OSTM1Q86WC4 334 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 ELMOD1Q8N336 334 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 MYCBPAPQ8TBZ2 947 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 SPPL3Q8TCT6 385 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 SPPL2BQ8TCT7 592 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 IPO4Q8TEX9 1081 aaKnown RBP13.75□□□□□ -0.21
PHGDH-218ENST00000641491 BAP1Q92560 729 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 MYLPFQ96A32 169 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 CYFIP2Q96F07 1278 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 SMARCD1Q96GM5 515 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 PANX2Q96RD6 677 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 SEPT5Q99719 369 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-218ENST00000641491 TTYH3Q9C0H2 523 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 MIS12Q9H081 205 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 DPEP3Q9H4B8 488 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 CHST7Q9NS84 486 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 FNIP2Q9P278 1114 aa13.75□□□□□ -0.21
PHGDH-218ENST00000641491 TRIM66O15016 1216 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 GRM6O15303 877 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 GLUD1P00367 558 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 BRD2P25440 801 aaKnown RBP13.74□□□□□ -0.21
PHGDH-218ENST00000641491 LMO2P25791 158 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 GRIK1P39086 918 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 BCAT1P54687 386 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 VEPH1Q14D04 833 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 SPA17Q15506 151 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 MGAT5BQ3V5L5 792 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 TPGS2Q68CL5 300 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 SCARA3Q6AZY7 606 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 CCDC149Q6ZUS6 474 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 SLC47A2Q86VL8 602 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 TMTC1Q8IUR5 882 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 SLC4A11Q8NBS3 891 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 TMEM35BQ8NCS4 154 aa13.74□□□□□ -0.21
PHGDH-218ENST00000641491 LNX1Q8TBB1 728 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-218ENST00000641491 SLC2A14Q8TDB8 520 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms