RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 RHOT1Q8IXI2 618 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 ZNF784Q8NCA9 323 aaPredicted RBP17.39■□□□□ 0.37
PHGDH-216ENST00000641375 APPL2Q8NEU8 664 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 MCEEQ96PE7 176 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 TSPAN16Q9UKR8 245 aa17.39■□□□□ 0.37
PHGDH-216ENST00000641375 ZNF623O75123 536 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 HEXIM1O94992 359 aaKnown RBP17.38■□□□□ 0.37
PHGDH-216ENST00000641375 GHRP10912 638 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 PYGMP11217 842 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 CD52P31358 61 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 GABRB2P47870 512 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 RPL7AP62424 266 aaKnown RBP17.38■□□□□ 0.37
PHGDH-216ENST00000641375 PIGHQ14442 188 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-216ENST00000641375 ZNF268Q14587 947 aaPredicted RBP17.38■□□□□ 0.37
PHGDH-216ENST00000641375 CYP4A22Q5TCH4 519 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 LHX8Q68G74 356 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 DPH6Q7L8W6 267 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 HDXQ7Z353 690 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 MRPL10Q7Z7H8 261 aaKnown RBP17.38■□□□□ 0.37
PHGDH-216ENST00000641375 CPNE8Q86YQ8 564 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 OR6B3Q8NGW1 331 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 ZFP42Q96MM3 310 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 CYTH4Q9UIA0 394 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 L1RE1Q9UN81 338 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 SIGLEC16A6NMB1 481 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 RAD51CO43502 376 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 HUS1O60921 280 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 THP07101 528 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 LILRA4P59901 499 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 PDCLQ13371 301 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 TRIM71Q2Q1W2 868 aaKnown RBP17.38■□□□□ 0.37
PHGDH-216ENST00000641375 CPXM1Q96SM3 734 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 FUT8Q9BYC5 575 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 DDX47Q9H0S4 455 aaKnown RBP17.38■□□□□ 0.37
PHGDH-216ENST00000641375 GOLGA2P5Q9HBQ8 144 aa17.38■□□□□ 0.37
PHGDH-216ENST00000641375 A8MXQ7 604 aa17.37■□□□□ 0.37
PHGDH-216ENST00000641375 KRT3P12035 628 aa17.37■□□□□ 0.37
PHGDH-216ENST00000641375 MLH1P40692 756 aa17.37■□□□□ 0.37
PHGDH-216ENST00000641375 PSMC1P62191 440 aaKnown RBP17.37■□□□□ 0.37
PHGDH-216ENST00000641375 LPIN1Q14693 890 aa17.37■□□□□ 0.37
PHGDH-216ENST00000641375 ACOT1Q86TX2 421 aa17.37■□□□□ 0.37
PHGDH-216ENST00000641375 TOP6BLQ8N6T0 577 aa17.37■□□□□ 0.37
PHGDH-216ENST00000641375 GDF3Q9NR23 364 aa17.37■□□□□ 0.37
PHGDH-216ENST00000641375 MTUS1Q9ULD2 1270 aa17.37■□□□□ 0.37
PHGDH-216ENST00000641375 A0A1W2PQ45 241 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-216ENST00000641375 A0A1W2PQY0 241 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 GLI1P08151 1106 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 FAM163BP0C2L3 166 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 SKIP12755 728 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 GNL1P36915 607 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-216ENST00000641375 MRPS25P82663 173 aaKnown RBP17.36■□□□□ 0.37
PHGDH-216ENST00000641375 LIMS2Q7Z4I7 341 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 XYLT1Q86Y38 959 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 SLC13A5Q86YT5 568 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-216ENST00000641375 NIPA2Q8N8Q9 360 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 C12orf29Q8N999 325 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 GSTCDQ8NEC7 633 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 FNIP1Q8TF40 1166 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 GAD1Q99259 594 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 TSPYL2Q9H2G4 693 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-216ENST00000641375 SNX25Q9H3E2 840 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 STARD7Q9NQZ5 370 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 HESX1Q9UBX0 185 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 A0A0U1RQF3 1178 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 ARL5CA6NH57 179 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 SPTLC1O15269 473 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 GJB6O95452 261 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 SETSIPP0DME0 302 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 SNX16P57768 344 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 GUCY2DQ02846 1103 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 ZNF618Q5T7W0 954 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 PPP1R26Q5T8A7 1209 aaPredicted RBP17.36■□□□□ 0.37
PHGDH-216ENST00000641375 AADACL2Q6P093 401 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 KRT222Q8N1A0 295 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 CRYBG2Q8N1P7 616 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 PLCD3Q8N3E9 789 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 KBTBD7Q8WVZ9 684 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 MAIP1Q8WWC4 291 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 DDX27Q96GQ7 796 aaKnown RBP17.36■□□□□ 0.37
PHGDH-216ENST00000641375 EPB41L5Q9HCM4 733 aa17.36■□□□□ 0.37
PHGDH-216ENST00000641375 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.36■□□□□ 0.37
PHGDH-216ENST00000641375 MEIS3P2A8K0S8 358 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 ERBB2P04626 1255 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 DSC3Q14574 896 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 GOLGA7BQ2TAP0 167 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 ARHGAP17Q68EM7 881 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 AGMOQ6ZNB7 445 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 KATNAL2Q8IYT4 538 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 SLC43A3Q8NBI5 491 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 UBA3Q8TBC4 463 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 PGBD4Q96DM1 585 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 TNIP3Q96KP6 325 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 UBN1Q9NPG3 1134 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 ST7Q9NRC1 585 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 USTQ9Y2C2 406 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 GOLGA8SH3BPF8 625 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 MAP2K7O14733 419 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 PHF2O75151 1096 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 CKBP12277 381 aa17.35■□□□□ 0.37
PHGDH-216ENST00000641375 CHRNA3P32297 505 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms