RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 MAIP1Q8WWC4 291 aa18.27■□□□□ 0.52
PHGDH-208ENST00000641023 DDX27Q96GQ7 796 aaKnown RBP18.27■□□□□ 0.52
PHGDH-208ENST00000641023 CPXM1Q96SM3 734 aa18.27■□□□□ 0.52
PHGDH-208ENST00000641023 MIS12Q9H081 205 aa18.27■□□□□ 0.52
PHGDH-208ENST00000641023 ERVK-5Q9HDB9 667 aa18.27■□□□□ 0.52
PHGDH-208ENST00000641023 GDAP2Q9NXN4 497 aa18.27■□□□□ 0.52
PHGDH-208ENST00000641023 TSPAN16Q9UKR8 245 aa18.27■□□□□ 0.52
PHGDH-208ENST00000641023 UTP11Q9Y3A2 253 aaKnown RBP18.27■□□□□ 0.52
PHGDH-208ENST00000641023 GRIN2DO15399 1336 aa18.27■□□□□ 0.52
PHGDH-208ENST00000641023 PHF2O75151 1096 aa18.27■□□□□ 0.51
PHGDH-208ENST00000641023 PDCLQ13371 301 aa18.27■□□□□ 0.51
PHGDH-208ENST00000641023 ITGA7Q13683 1181 aa18.27■□□□□ 0.51
PHGDH-208ENST00000641023 SOWAHAQ2M3V2 549 aa18.27■□□□□ 0.51
PHGDH-208ENST00000641023 SV2CQ496J9 727 aa18.27■□□□□ 0.51
PHGDH-208ENST00000641023 IPO4Q8TEX9 1081 aaKnown RBP18.27■□□□□ 0.51
PHGDH-208ENST00000641023 GDAP1L1Q96MZ0 367 aa18.27■□□□□ 0.51
PHGDH-208ENST00000641023 NFU1Q9UMS0 254 aa18.27■□□□□ 0.51
PHGDH-208ENST00000641023 A8MXQ7 604 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 TTI1O43156 1089 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 GABRB2P47870 512 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 DR1Q01658 176 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 SMC1AQ14683 1233 aaKnown RBP18.26■□□□□ 0.51
PHGDH-208ENST00000641023 PRELID2Q8N945 189 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 C12orf29Q8N999 325 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 CASKIN2Q8WXE0 1202 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 MAGOHBQ96A72 148 aaKnown RBP18.26■□□□□ 0.51
PHGDH-208ENST00000641023 RUNDC3BQ96NL0 473 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 RAB17Q9H0T7 212 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 SLC38A7Q9NVC3 462 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 SCN1AP35498 2009 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 GOLGA8SH3BPF8 625 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 FSCN2O14926 492 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 SOX4Q06945 474 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-208ENST00000641023 PTK7Q13308 1070 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 ARHGEF6Q15052 776 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 DAB2IPQ5VWQ8 1189 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 SND1Q7KZF4 910 aaKnown RBP eCLIP18.26■□□□□ 0.511e-7■■■■□ 19.4
PHGDH-208ENST00000641023 ACOT1Q86TX2 421 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 XYLT1Q86Y38 959 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 KATNAL2Q8IYT4 538 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 NIPA2Q8N8Q9 360 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 APPL2Q8NEU8 664 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 UBA3Q8TBC4 463 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 FNIP1Q8TF40 1166 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 GOLGA2P5Q9HBQ8 144 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 ST7Q9NRC1 585 aa18.26■□□□□ 0.51
PHGDH-208ENST00000641023 LRPAP1P30533 357 aa18.25■□□□□ 0.51
PHGDH-208ENST00000641023 CETN2P41208 172 aa18.25■□□□□ 0.51
PHGDH-208ENST00000641023 ACLYP53396 1101 aa18.25■□□□□ 0.51
PHGDH-208ENST00000641023 TAS2R40P59535 323 aa18.25■□□□□ 0.51
PHGDH-208ENST00000641023 NNTQ13423 1086 aa18.25■□□□□ 0.51
PHGDH-208ENST00000641023 LRRC38Q5VT99 294 aa18.25■□□□□ 0.51
PHGDH-208ENST00000641023 CCDC50Q8IVM0 306 aa18.25■□□□□ 0.51
PHGDH-208ENST00000641023 EXD1Q8NHP7 514 aa18.25■□□□□ 0.51
PHGDH-208ENST00000641023 CAVIN3Q969G5 261 aa18.25■□□□□ 0.51
PHGDH-208ENST00000641023 GLT1D1Q96MS3 346 aa18.25■□□□□ 0.51
PHGDH-208ENST00000641023 PPP1R10Q96QC0 940 aaKnown RBP18.25■□□□□ 0.51
PHGDH-208ENST00000641023 HESX1Q9UBX0 185 aa18.25■□□□□ 0.51
PHGDH-208ENST00000641023 RASAL2Q9UJF2 1139 aa18.25■□□□□ 0.51
PHGDH-208ENST00000641023 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-208ENST00000641023 FAM187AA6NFU0 413 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 MOXD2PA6NHM9 499 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 PTGESO14684 152 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 HUS1O60921 280 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 ERBB2P04626 1255 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 RFC1P35251 1148 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-208ENST00000641023 GNL1P36915 607 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-208ENST00000641023 HLTFQ14527 1009 aaKnown RBP eCLIP18.24■□□□□ 0.51
PHGDH-208ENST00000641023 CYP1B1Q16678 543 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 PPP1R26Q5T8A7 1209 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-208ENST00000641023 ZFP42Q96MM3 310 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 AGO3Q9H9G7 860 aaKnown RBP18.24■□□□□ 0.51
PHGDH-208ENST00000641023 TJP2Q9UDY2 1190 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 PCYOX1Q9UHG3 505 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 PADI3Q9ULW8 664 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 F8VP50 259 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 SPTLC1O15269 473 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 RARAP10276 462 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 LILRA4P59901 499 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 ZNF252P-AS1Q0IIN9 211 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 GOLGA7BQ2TAP0 167 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 CCDC137Q6PK04 289 aaKnown RBP18.24■□□□□ 0.51
PHGDH-208ENST00000641023 ZDHHC14Q8IZN3 488 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 SEC14L1Q92503 715 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 MCRS1Q96EZ8 462 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 SNX25Q9H3E2 840 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 GIT1Q9Y2X7 761 aa18.24■□□□□ 0.51
PHGDH-208ENST00000641023 PDCD11Q14690 1871 aaKnown RBP18.23■□□□□ 0.51
PHGDH-208ENST00000641023 TCRBV7S2A1N4TA0A589 114 aa18.23■□□□□ 0.51
PHGDH-208ENST00000641023 BHMG1C9JSJ3 638 aaPredicted RBP18.23■□□□□ 0.51
PHGDH-208ENST00000641023 PODXLO00592 558 aa18.23■□□□□ 0.51
PHGDH-208ENST00000641023 THP07101 528 aa18.23■□□□□ 0.51
PHGDH-208ENST00000641023 SETSIPP0DME0 302 aa18.23■□□□□ 0.51
PHGDH-208ENST00000641023 PSMA2P25787 234 aa18.23■□□□□ 0.51
PHGDH-208ENST00000641023 CD52P31358 61 aa18.23■□□□□ 0.51
PHGDH-208ENST00000641023 MLH1P40692 756 aa18.23■□□□□ 0.51
PHGDH-208ENST00000641023 RAB27AP51159 221 aa18.23■□□□□ 0.51
PHGDH-208ENST00000641023 SNX16P57768 344 aa18.23■□□□□ 0.51
PHGDH-208ENST00000641023 OGDHQ02218 1023 aa18.23■□□□□ 0.51
PHGDH-208ENST00000641023 ODF2Q5BJF6 829 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms