RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 MYO6Q9UM54 1294 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 USP20Q9Y2K6 914 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 STYXL1Q9Y6J8 313 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 NUMBLQ9Y6R0 609 aa12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 MTCL1Q9Y4B5 1905 aaKnown RBP12.76□□□□□ -0.37
ERGIC3-220ENST00000640748 EIF3CLB5ME19 914 aaKnown RBP12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 PMM2O15305 246 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 TADA2AO75478 443 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 SF3B1O75533 1304 aaKnown RBP eCLIP12.75□□□□□ -0.377e-7■■■■■ 79
ERGIC3-220ENST00000640748 IPO7O95373 1038 aaKnown RBP12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 LDHAP00338 332 aaKnown RBP12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 ADRB2P07550 413 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 DCNP07585 359 aaKnown RBP12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 GLULP15104 373 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 FOXK2Q01167 660 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 COL4A3Q01955 1670 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 ASIC2Q16515 512 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 FAM187BQ17R55 369 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 OTOGLQ3ZCN5 2332 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 CBWD6Q4V339 395 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 CBWD3Q5JTY5 395 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 CBWD5Q5RIA9 395 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 DPY19L2P1Q6NXN4 242 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 GPR179Q6PRD1 2367 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 ACRBPQ8NEB7 543 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 LNX1Q8TBB1 728 aaPredicted RBP12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 PIK3R5Q8WYR1 880 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 FGF14Q92915 247 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 PRIMPOLQ96LW4 560 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 CCDC42Q96M95 316 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 SPAG5Q96R06 1193 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 EIF3CQ99613 913 aaKnown RBP12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 CCDC113Q9H0I3 377 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 SIX2Q9NPC8 291 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 ARHGEF3Q9NR81 526 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 PAXBP1Q9Y5B6 917 aa12.75□□□□□ -0.37
ERGIC3-220ENST00000640748 SSU72P8A0A1W2PR75 194 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 ZNF233A6NK53 670 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 STK25O00506 426 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 EXTL3O43909 919 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 SERPING1P05155 500 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 UCHL3P15374 230 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 FSHRP23945 695 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 MATR3P43243 847 aaKnown RBP eCLIP12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 ETF1P62495 437 aaKnown RBP12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 CREMQ03060 361 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 CYP24A1Q07973 514 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 MAPK8IP2Q13387 824 aaPredicted RBP12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 RAPGEF1Q13905 1077 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 FAM171A1Q5VUB5 890 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 TRIM65Q6PJ69 517 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 PARM1Q6UWI2 310 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 ZPBP2Q6X784 338 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 GRASPQ7Z6J2 395 aaPredicted RBP12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 CBWD2Q8IUF1 395 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 EHBP1Q8NDI1 1231 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 ZSWIM2Q8NEG5 633 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 KIF18AQ8NI77 898 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 ZNF592Q92610 1267 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 TTPALQ9BTX7 342 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 MRPL4Q9BYD3 311 aaKnown RBP12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 FOXQ1Q9C009 403 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 INTS2Q9H0H0 1204 aaKnown RBP12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 DEF6Q9H4E7 631 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 PRMT7Q9NVM4 692 aaPredicted RBP12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 SNTG2Q9NY99 539 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 AIPL1Q9NZN9 384 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 AGO2Q9UKV8 859 aaKnown RBP12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 CDH7Q9ULB5 785 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 FHOD1Q9Y613 1164 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 R4GN57 208 aa12.74□□□□□ -0.37
ERGIC3-220ENST00000640748 LRRN2O75325 713 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 RECQL4O94761 1208 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 PRKCBP05771 671 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 RFX1P22670 979 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 GTF2H1P32780 548 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 EIF4A3P38919 411 aaKnown RBP12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 MXI1P50539 228 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 TERF1P54274 439 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 STARD6P59095 220 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 GPC5P78333 572 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 DLG4P78352 724 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 APBA1Q02410 837 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 SPA17Q15506 151 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 PSMD5Q16401 504 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 MAPK6Q16659 721 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 ARHGAP29Q52LW3 1261 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 TDRD12Q587J7 1177 aaKnown RBP12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 C1orf220Q5T0J3 134 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 EEF1DP3Q658K8 133 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 DCLRE1AQ6PJP8 1040 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 CD300LGQ6UXG3 332 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 FMNL3Q8IVF7 1028 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 MAML2Q8IZL2 1156 aaPredicted RBP12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 PLEKHO2Q8TD55 490 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 PARD3BQ8TEW8 1205 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 FGF13Q92913 245 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 FAM213AQ9BRX8 229 aa12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 TARS2Q9BW92 718 aaKnown RBP12.73□□□□□ -0.37
ERGIC3-220ENST00000640748 ARHGAP20Q9P2F6 1191 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms