RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TMEM164Q5U3C3 297 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ANXA8L1Q5VT79 327 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ENOSF1Q7L5Y1 443 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 NATD1Q8N6N6 113 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 NIPA2Q8N8Q9 360 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 AVL9Q8NBF6 648 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 GRPEL2Q8TAA5 225 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 DNAJC9Q8WXX5 260 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 REXO5Q96IC2 774 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF845Q96IR2 970 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 PSD2Q9BQI7 771 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 KCNN2Q9H2S1 579 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 SPACA1Q9HBV2 294 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ADPRHL2Q9NX46 363 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 SAMM50Q9Y512 469 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 PCDHGB7Q9Y5F8 929 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 SESN1Q9Y6P5 492 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 NUMBLQ9Y6R0 609 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 DICER1Q9UPY3 1922 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 USP19O94966 1318 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TEX51A0A1B0GUA7 166 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 NCF1BA6NI72 391 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 NCF1CA8MVU1 366 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TP73O15350 636 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TRIM27P14373 513 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 HNRNPFP52597 415 aaKnown RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 COPS2P61201 443 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 GTF3C1Q12789 2109 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ITGA9Q13797 1035 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 KCTD21Q4G0X4 260 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 OTOP3Q7RTS5 596 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 FBXO15Q8NCQ5 510 aaPredicted RBP4.5□□□□□ -1.69
SCN3A-209ENST00000639244 NCSTNQ92542 709 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TCEAL3Q969E4 200 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 COX4I2Q96KJ9 171 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 TMEM237Q96Q45 408 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 CNPY3Q9BT09 278 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 PLCL2Q9UPR0 1127 aa4.5□□□□□ -1.69
SCN3A-209ENST00000639244 ESYT2A0FGR8 921 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 ERVV-2B6SEH9 535 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 G3V3G9 751 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 PFDN6O15212 129 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 SEMA3DO95025 777 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 C7P10643 843 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 KRT3P12035 628 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 ADAM9Q13443 819 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 DCAF8Q5TAQ9 597 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 PLEKHO2Q8TD55 490 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 NUP50Q9UKX7 468 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 ERVK-11Q9UQG0 969 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 PMF1-BGLAPU3KQ54 211 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 DAPK1P53355 1430 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 FHOD3Q2V2M9 1422 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 NDUFS8O00217 210 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 RASGRF2O14827 1237 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 SOCS5O75159 536 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF165P49910 485 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 PTPN5P54829 565 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 ECT2LQ008S8 904 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 NR5A1Q13285 461 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 PTRHD1Q6GMV3 140 aaKnown RBP4.49□□□□□ -1.69
SCN3A-209ENST00000639244 ZNF852Q6ZMS4 543 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 TOGARAM2Q6ZUX3 1019 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 GPR142Q7Z601 462 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 SLFN11Q7Z7L1 901 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 RHPN2Q8IUC4 686 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 CDH26Q8IXH8 852 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 PRPF31Q8WWY3 499 aaKnown RBP4.49□□□□□ -1.69
SCN3A-209ENST00000639244 BBS4Q96RK4 519 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 PRKD2Q9BZL6 878 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 OLA1Q9NTK5 396 aaKnown RBP4.49□□□□□ -1.69
SCN3A-209ENST00000639244 TSR3Q9UJK0 312 aaKnown RBP4.49□□□□□ -1.69
SCN3A-209ENST00000639244 PCDHGA1Q9Y5H4 931 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 VPS8Q8N3P4 1428 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 SHOXO15266 292 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 ADAM11O75078 769 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 CYP11A1P05108 521 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 RFC4P35249 363 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 RECQLP46063 649 aaPredicted RBP4.49□□□□□ -1.69
SCN3A-209ENST00000639244 SCTRP47872 440 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 CLDN10P78369 228 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 RHAGQ02094 409 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 PPARAQ07869 468 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 SERINC3Q13530 473 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 ALG11Q2TAA5 492 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 C16orf86Q6ZW13 317 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 CARFQ8N187 725 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 CAMK1GQ96NX5 476 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 SARGQ9BW04 601 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 SAMSN1Q9NSI8 373 aaKnown RBP4.49□□□□□ -1.69
SCN3A-209ENST00000639244 ASIC3Q9UHC3 531 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 TRPV2Q9Y5S1 764 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 MYBBP1AQ9BQG0 1328 aaKnown RBP4.49□□□□□ -1.69
SCN3A-209ENST00000639244 KANSL1LA0AUZ9 987 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 ATP2A1O14983 1001 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 PON1P27169 355 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 ADCY7P51828 1080 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 NUP54Q7Z3B4 507 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 DPP10Q8N608 796 aa4.49□□□□□ -1.69
SCN3A-209ENST00000639244 SYTL4Q96C24 671 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms