RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 NIF3L1Q9GZT8 377 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 TRPC5OSA6NMA1 111 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 GLI1P08151 1106 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 DEFA1P59665 94 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 DEFA3P59666 94 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 EXOSC4Q9NPD3 245 aaKnown RBP19.25■□□□□ 0.67
SCARB2-213ENST00000638680 ALBP02768 609 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 SLC7A14Q8TBB6 771 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 CALML6Q8TD86 181 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 DCUN1D1Q96GG9 259 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 MXRA8Q9BRK3 442 aa19.25■□□□□ 0.67
SCARB2-213ENST00000638680 HNRNPRO43390 633 aaKnown RBP19.24■□□□□ 0.67
SCARB2-213ENST00000638680 GYS1P13807 737 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 TOB1P50616 345 aaPredicted RBP19.24■□□□□ 0.67
SCARB2-213ENST00000638680 C4orf22Q6V702 233 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 CCDC81Q6ZN84 652 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 SATB2Q9UPW6 733 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 TPST1O60507 370 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 DAGLBQ8NCG7 672 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 SGF29Q96ES7 293 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 SEMA6BQ9H3T3 888 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 DDX20Q9UHI6 824 aaKnown RBP19.24■□□□□ 0.67
SCARB2-213ENST00000638680 PKP3Q9Y446 797 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 PTGER2P43116 358 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 SLC44A4Q53GD3 710 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 ABCA6Q8N139 1617 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 TTI2Q6NXR4 508 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 TBC1D16Q8TBP0 767 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 ATP8B4Q8TF62 1192 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 ILKAPQ9H0C8 392 aaPredicted RBP19.24■□□□□ 0.67
SCARB2-213ENST00000638680 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.24■□□□□ 0.674e-7■■□□□ 14.5
SCARB2-213ENST00000638680 IL1RAPL1Q9NZN1 696 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 PIM2Q9P1W9 311 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 RUNX1T1Q06455 604 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 GPR141Q7Z602 305 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 CCDC60Q8IWA6 550 aaPredicted RBP19.24■□□□□ 0.67
SCARB2-213ENST00000638680 SCFD2Q8WU76 684 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 OTUD5Q96G74 571 aa19.24■□□□□ 0.67
SCARB2-213ENST00000638680 MOV10L1Q9BXT6 1211 aaKnown RBP19.24■□□□□ 0.67
SCARB2-213ENST00000638680 TULP4Q9NRJ4 1543 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 AVPR1AP37288 418 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 NPEPPSP55786 919 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 TMEM120AQ9BXJ8 343 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 IGSF9BQ9UPX0 1349 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 USP1O94782 785 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 IL18RAPO95256 599 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 SKOR1P84550 965 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 RAD51Q06609 339 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 ARHGEF6Q15052 776 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 C2CD6Q53TS8 623 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 DCAF6Q58WW2 860 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 KCNV1Q6PIU1 500 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 FBXO25Q8TCJ0 367 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 DDI1Q8WTU0 396 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 HMBSP08397 361 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 CYP11B2P19099 503 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 PKN3Q6P5Z2 889 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 MICU2Q8IYU8 434 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 TFB1MQ8WVM0 346 aaKnown RBP19.23■□□□□ 0.67
SCARB2-213ENST00000638680 DCLRE1BQ9H816 532 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 FBXW4P57775 412 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 ATF7IP2Q5U623 682 aa19.23■□□□□ 0.67
SCARB2-213ENST00000638680 GLRA3O75311 464 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 CALB2P22676 271 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 FRMD8Q9BZ67 464 aaPredicted RBP19.22■□□□□ 0.67
SCARB2-213ENST00000638680 LATS2Q9NRM7 1088 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 ZCCHC11Q5TAX3 1644 aaKnown RBP19.22■□□□□ 0.67
SCARB2-213ENST00000638680 CUL2Q13617 745 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 NFIXQ14938 502 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 FUT11Q495W5 492 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 CDC42EP5Q6NZY7 148 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 DDHD1Q8NEL9 900 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 OSGEPQ9NPF4 335 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 ASB14A6NK59 587 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 PSMA4P25789 261 aaKnown RBP19.22■□□□□ 0.67
SCARB2-213ENST00000638680 TRIM16LQ309B1 348 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 FIGNQ5HY92 759 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 DENND5BQ6ZUT9 1274 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 TBX20Q9UMR3 447 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 SKAP2O75563 359 aaPredicted RBP19.22■□□□□ 0.67
SCARB2-213ENST00000638680 PDE5AO76074 875 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 NR3C2P08235 984 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 TFE3P19532 575 aaPredicted RBP19.22■□□□□ 0.67
SCARB2-213ENST00000638680 RIC8BQ9NVN3 520 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 ARHGAP20Q9P2F6 1191 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 DCDC2Q9UHG0 476 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 AQP5P55064 265 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 STX5Q13190 355 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 SYTL3Q4VX76 610 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 AARS2Q5JTZ9 985 aaKnown RBP19.22■□□□□ 0.67
SCARB2-213ENST00000638680 CDKAL1Q5VV42 579 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 LRRC6Q86X45 466 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 APOBEC3FQ8IUX4 373 aaKnown RBP19.22■□□□□ 0.67
SCARB2-213ENST00000638680 SNX31Q8N9S9 440 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 RIT2Q99578 217 aa19.22■□□□□ 0.67
SCARB2-213ENST00000638680 USP31Q70CQ4 1352 aa19.21■□□□□ 0.67
SCARB2-213ENST00000638680 NFIBO00712 420 aa19.21■□□□□ 0.67
SCARB2-213ENST00000638680 THRAP10827 490 aa19.21■□□□□ 0.67
SCARB2-213ENST00000638680 STIP1P31948 543 aaKnown RBP19.21■□□□□ 0.67
SCARB2-213ENST00000638680 MLH1P40692 756 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms