RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 POP1Q99575 1024 aaKnown RBP12.59□□□□□ -0.39
CAPN3-221ENST00000638141 NEURL2Q9BR09 285 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 THTPAQ9BU02 230 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 NMUR2Q9GZQ4 415 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 TRPC7Q9HCX4 862 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 PALMDQ9NP74 551 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 GIT1Q9Y2X7 761 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 ERVV-1B6SEH8 477 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 ZNF701M0R085 212 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-221ENST00000638141 DNAJA2O60884 412 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 PLA2G4BP0C869 781 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 PTPN2P17706 415 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 CCT8P50990 548 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 ARL4CP56559 192 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 ARPC4P59998 168 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 DYNLL1P63167 89 aaKnown RBP12.59□□□□□ -0.39
CAPN3-221ENST00000638141 UBE4AQ14139 1066 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 SF3B3Q15393 1217 aaKnown RBP12.59□□□□□ -0.39
CAPN3-221ENST00000638141 C4orf33Q8N1A6 199 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 AGPAT1Q99943 283 aa12.59□□□□□ -0.39
CAPN3-221ENST00000638141 UNKQ9C0B0 810 aaKnown RBP12.59□□□□□ -0.39
CAPN3-221ENST00000638141 EML1O00423 815 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 ZNF23P17027 643 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 ADRA1DP25100 572 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 PMLP29590 882 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 ALDH3B2P48448 385 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 CCR3P51677 355 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 CAMK2BQ13554 666 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 NCOA4Q13772 614 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 HIC1Q14526 733 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 DRAP1Q14919 205 aaPredicted RBP12.58□□□□□ -0.4
CAPN3-221ENST00000638141 LPCAT4Q643R3 524 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 NIPAL1Q6NVV3 410 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 GPBP1Q86WP2 473 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 IQCF2Q8IXL9 164 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 CATSPER1Q8NEC5 780 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 PPP1R14CQ8TAE6 165 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 PSPC1Q8WXF1 523 aaKnown RBP12.58□□□□□ -0.4
CAPN3-221ENST00000638141 ATP6V0A1Q93050 837 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 BORCS5Q969J3 196 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 C9orf72Q96LT7 481 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 HAUS8Q9BT25 410 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 FGFBP2Q9BYJ0 223 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 RRN3Q9NYV6 651 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 IGSF9Q9P2J2 1179 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 DNAJC12Q9UKB3 198 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 SOX13Q9UN79 622 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 TTLL3Q9Y4R7 772 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 TRIM17Q9Y577 477 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 NUP98P52948 1817 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 POTEMA6NI47 508 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 STARD3NLO95772 234 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 HSPA13P48723 471 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 TFAP4Q01664 338 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 OVGP1Q12889 678 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 ZBTB17Q13105 803 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 DCAF17Q5H9S7 520 aaPredicted RBP12.58□□□□□ -0.4
CAPN3-221ENST00000638141 EFHC2Q5JST6 749 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 RFX8Q6ZV50 586 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 TTC7BQ86TV6 843 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 SYNE4Q8N205 404 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 STARD8Q92502 1023 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 EME1Q96AY2 570 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 CEP95Q96GE4 821 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 IL17RBQ9NRM6 502 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 DNAJC17Q9NVM6 304 aaKnown RBP12.58□□□□□ -0.4
CAPN3-221ENST00000638141 SELENONQ9NZV5 590 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 C6orf203Q9P0P8 240 aaPredicted RBP12.58□□□□□ -0.4
CAPN3-221ENST00000638141 CCPG1Q9ULG6 757 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 TSC22D4Q9Y3Q8 395 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 DTNAQ9Y4J8 743 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 MAD1L1Q9Y6D9 718 aa12.58□□□□□ -0.4
CAPN3-221ENST00000638141 GSTTP1A0A1W2PQM5 241 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 TXNDC9O14530 226 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 SLC37A4O43826 429 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 NR3C1P04150 777 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 MYL2P10916 166 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 GZMAP12544 262 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 NFKBIAP25963 317 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 PHBP35232 272 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 CPOXP36551 454 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 ADCY8P40145 1251 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 RPS3AP61247 264 aaKnown RBP12.57□□□□□ -0.4
CAPN3-221ENST00000638141 MYBPC1Q00872 1141 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 NDUFA5Q16718 116 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 IL23RQ5VWK5 629 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 PGM2L1Q6PCE3 622 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 ELMSAN1Q6PJG2 1045 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 DCDC5Q6ZRR9 648 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 PRUNE1Q86TP1 453 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 RBM15Q96T37 977 aaKnown RBP eCLIP12.57□□□□□ -0.4
CAPN3-221ENST00000638141 NUDT12Q9BQG2 462 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 MAK16Q9BXY0 300 aaKnown RBP12.57□□□□□ -0.4
CAPN3-221ENST00000638141 DCLK3Q9C098 648 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 GPR88Q9GZN0 384 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 KLRF2D3W0D1 207 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 LRRN2O75325 713 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 AKAP3O75969 853 aa12.57□□□□□ -0.4
CAPN3-221ENST00000638141 OXSR1O95747 527 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-221ENST00000638141 CYP2C9P11712 490 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms