RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 BRD9Q9H8M2 597 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 TRPV4Q9HBA0 871 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 SIT1Q9Y3P8 196 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 COL4A3Q01955 1670 aa17.96■□□□□ 0.47
CACNA1A-259ENST00000638114 PDXKO00764 312 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 PHACTR2O75167 634 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 RHOBTB3O94955 611 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 CLSTN1O94985 981 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 KIF20AO95235 890 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 NR3C1P04150 777 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 DCNP07585 359 aaKnown RBP17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 PSMC3P17980 439 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 CDC25CP30307 473 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 GPR15P49685 360 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 CYP4F8P98187 520 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 CCDC142Q17RM4 750 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 GPR158Q5T848 1215 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 TPRG1Q6ZUI0 275 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 SPATA2LQ8IUW3 424 aaPredicted RBP17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 SLC9A9Q8IVB4 645 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 PJA1Q8NG27 643 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 PLEKHO2Q8TD55 490 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 DEPDC1BQ8WUY9 529 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 KBTBD7Q8WVZ9 684 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 CCDC34Q96HJ3 373 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 PKMYT1Q99640 499 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 SYT15Q9BQS2 421 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 ABCB6Q9NP58 842 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 DMAC2Q9NW81 257 aa17.95■□□□□ 0.46
CACNA1A-259ENST00000638114 KANSL1LA0AUZ9 987 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 MYBPHLA2RUH7 354 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 GOLGA6L4A6NEF3 574 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 HEPACAM2A8MVW5 462 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 CALUO43852 315 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 ATP2C2O75185 946 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 WARSP23381 471 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 CYP2F1P24903 491 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 LMO2P25791 158 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 GDI1P31150 447 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 MRE11P49959 708 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 MYL6P60660 151 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 PSMC1P62191 440 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 RPL10AP62906 217 aaKnown RBP17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 TNNC1P63316 161 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 BIRC3Q13489 604 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 UBXN2BQ14CS0 331 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 DDR2Q16832 855 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 WDR72Q3MJ13 1102 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 SDHAF4Q5VUM1 108 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 CEP135Q66GS9 1140 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 LIMS2Q7Z4I7 341 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 GPIHBP1Q8IV16 184 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 ARID3BQ8IVW6 561 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 STKLD1Q8NE28 680 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 PARD3BQ8TEW8 1205 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 DNASE1L2Q92874 299 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 E2F7Q96AV8 911 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 MKNK1Q9BUB5 465 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 SNX25Q9H3E2 840 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 IL21Q9HBE4 155 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 HEBP1Q9NRV9 189 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 CDH9Q9ULB4 789 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 MAGED2Q9UNF1 606 aaPredicted RBP17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 MAPK8IP1Q9UQF2 711 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 NCANO14594 1321 aa17.94■□□□□ 0.46
CACNA1A-259ENST00000638114 LRRIQ3A6PVS8 624 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 DPYSL4O14531 572 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 PDGFRBP09619 1106 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 CSH1P0DML2 217 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 CSH2P0DML3 217 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 CD72P21854 359 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 C4orf50Q6ZRC1 276 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 MFSD6LQ8IWD5 586 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 SCN4BQ8IWT1 228 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 YAF2Q8IY57 180 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 IRF7Q92985 503 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 SYAP1Q96A49 352 aaPredicted RBP17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 RSPRY1Q96DX4 576 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 MRPL45Q9BRJ2 306 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 DDX23Q9BUQ8 820 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 TASP1Q9H6P5 420 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 NXF1Q9UBU9 619 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 FRMD4BQ9Y2L6 1034 aa17.93■□□□□ 0.46
CACNA1A-259ENST00000638114 MIA3Q5JRA6 1907 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 ZNF263O14978 683 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 LRRN2O75325 713 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 HMGA1P17096 107 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 ATICP31939 592 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 GNL1P36915 607 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 AP3M2P53677 418 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 KCNB1Q14721 858 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 ANGPT1Q15389 498 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 MAPRE1Q15691 268 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 CFAP221Q4G0U5 840 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 TDRD10Q5VZ19 366 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 FAM171BQ6P995 826 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 OR6B3Q8NGW1 331 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 TMEM174Q8WUU8 243 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 MYLPFQ96A32 169 aa17.92■□□□□ 0.46
CACNA1A-259ENST00000638114 FUBP3Q96I24 572 aaKnown RBP eCLIP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms