RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 SNAP47Q5SQN1 464 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 PCMTD2Q9NV79 361 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 SCN3BQ9NY72 215 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 UGGT1Q9NYU2 1555 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 QRICH2Q9H0J4 1663 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 ACSL4O60488 711 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 MBL2P11226 248 aaPredicted RBP16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 ATP6V1B1P15313 513 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 IFNAR1P17181 557 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 USP10Q14694 798 aaKnown RBP16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 SLC30A5Q8TAD4 765 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 DTNBP1Q96EV8 351 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 TNIP3Q96KP6 325 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 SEPT3Q9UH03 358 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 A8MX80 341 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 ATP8B1O43520 1251 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 POTEIP0CG38 1075 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 CAMK1Q14012 370 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 POTEGQ6S5H5 508 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 P3H2Q8IVL5 708 aa16.99■□□□□ 0.31
CACNA1A-258ENST00000638029 CTSEP14091 401 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 TAF8Q7Z7C8 310 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 GRXCR2A6NFK2 248 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 TCP11X1B4DZS4 312 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 EIF2S1P05198 315 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 CKMP06732 381 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 MICU2Q8IYU8 434 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 RTL3Q8N8U3 475 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 ROGDIQ9GZN7 287 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 IL1RAPL1Q9NZN1 696 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 TRIM3O75382 744 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 MTRF1O75570 445 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 FGFR2P21802 821 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 KLRC2P26717 231 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 KCNH2Q12809 1159 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 UTS2BQ765I0 119 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 WDR36Q8NI36 951 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 PRRG4Q9BZD6 226 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 SOHLH2Q9NX45 425 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 WWOXQ9NZC7 414 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 HEG1Q9ULI3 1381 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 PDHA2P29803 388 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 TMEM132DQ14C87 1099 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 CEP95Q96GE4 821 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 CEP72Q9P209 647 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 HEATR9A2RTY3 570 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 TPST1O60507 370 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 KLHL17Q6TDP4 642 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 B3GALNT2Q8NCR0 500 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 FAM96AQ9H5X1 160 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 PTPRHQ9HD43 1115 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 STAP2Q9UGK3 403 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 TMEM2Q9UHN6 1383 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 DSG4Q86SJ6 1040 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 C19orf18Q8NEA5 215 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 AIFM3Q96NN9 605 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 ECSITQ9BQ95 431 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 RHBGQ9H310 441 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 AGO2Q9UKV8 859 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 UMPSP11172 480 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 PLA2G4AP47712 749 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 SNAPC2Q13487 334 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 DOK6Q6PKX4 331 aa16.98■□□□□ 0.31
CACNA1A-258ENST00000638029 CITO14578 2027 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 CCDC188H7C350 402 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 RGS4P49798 205 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 ABCE1P61221 599 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 KLC1Q07866 573 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 TERF2Q15554 542 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 RESP18Q5W5W9 173 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 DNAJC5BQ9UF47 199 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 PLA2G4CQ9UP65 541 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 NRG3P56975 720 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 TRIM65Q6PJ69 517 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 VSTM4Q8IW00 320 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 THUMPD3Q9BV44 507 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 PRKD2Q9BZL6 878 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 PARVAQ9NVD7 372 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 TMEM260Q9NX78 707 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 MAP2P11137 1827 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 TRIM49BA6NDI0 452 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 C3orf70A6NLC5 250 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 HLA-DQA1Q5Y7H0 255 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 CDYLQ9Y232 598 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 ZNF335Q9H4Z2 1342 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 QARSP47897 775 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 CLEC16AQ2KHT3 1053 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 UCMAQ8WVF2 138 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 CPA5Q8WXQ8 436 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 CHST12Q9NRB3 414 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 RUVBL2Q9Y230 463 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 RBM7Q9Y580 266 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 ANKARQ7Z5J8 1434 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 MYH9P35579 1960 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 FTLP02792 175 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 ARF3P61204 181 aaPredicted RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 ARF1P84077 181 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 SGCGQ13326 291 aa16.97■□□□□ 0.31
CACNA1A-258ENST00000638029 TRIM16LQ309B1 348 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms