RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 CASQ1P31415 396 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 RFC2P35250 354 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 BRCC3P46736 316 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 HADHBP55084 474 aaKnown RBP16.24■□□□□ 0.19
CTSD-211ENST00000637387 AMPD2Q01433 879 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 CCDC142Q17RM4 750 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 PAN2Q504Q3 1202 aaKnown RBP16.24■□□□□ 0.19
CTSD-211ENST00000637387 C2CD6Q53TS8 623 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 WSCD1Q658N2 575 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 LLGL2Q6P1M3 1020 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.24■□□□□ 0.191e-9■■■□□ 19.2
CTSD-211ENST00000637387 ACOT1Q86TX2 421 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 C12orf29Q8N999 325 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 OR6B3Q8NGW1 331 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 TPCN2Q8NHX9 752 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 SLC35G2Q8TBE7 412 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 ZNF653Q96CK0 615 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 DDX27Q96GQ7 796 aaKnown RBP16.24■□□□□ 0.19
CTSD-211ENST00000637387 UROC1Q96N76 676 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 LPIN3Q9BQK8 851 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 HCSTQ9UBK5 93 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 DNAJB4Q9UDY4 337 aa16.24■□□□□ 0.19
CTSD-211ENST00000637387 CHORDC1Q9UHD1 332 aaPredicted RBP16.24■□□□□ 0.19
CTSD-211ENST00000637387 HUS1O60921 280 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 PALMO75781 387 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 MTA2O94776 668 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 MICAL2O94851 1124 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 ATP1A1P05023 1023 aaKnown RBP16.23■□□□□ 0.19
CTSD-211ENST00000637387 MMP8P22894 467 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 NSFP46459 744 aaKnown RBP16.23■□□□□ 0.19
CTSD-211ENST00000637387 GPC5P78333 572 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 PKDCCQ504Y2 493 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 SGO2Q562F6 1265 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 CRYBG2Q8N1P7 616 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 URGCPQ8TCY9 931 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 NAPGQ99747 312 aaPredicted RBP16.23■□□□□ 0.19
CTSD-211ENST00000637387 C11orf70Q9BRQ4 267 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 PBX4Q9BYU1 374 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 LHX5Q9H2C1 402 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 GOLPH3Q9H4A6 298 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 L2HGDHQ9H9P8 463 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 TSPAN16Q9UKR8 245 aa16.23■□□□□ 0.19
CTSD-211ENST00000637387 TCRBV5S1A1TA0A578 114 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 A8MXQ7 604 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 TMEM189-UBE2V1I3L0A0 370 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 I3L4J1 428 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 M0QZQ0 153 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 ENC1O14682 589 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 MED7O43513 233 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 PFKMP08237 780 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 FAM163BP0C2L3 166 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 RRM1P23921 792 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 PBX2P40425 430 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 CNGA2Q16280 664 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 PTPN20Q4JDL3 420 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 PPP1R26Q5T8A7 1209 aaPredicted RBP16.22■□□□□ 0.19
CTSD-211ENST00000637387 KIAA0319Q5VV43 1072 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 NPAS4Q8IUM7 802 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 HASPINQ8TF76 798 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 ZNF518BQ9C0D4 1074 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 PDCL3Q9H2J4 239 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 AVENQ9NQS1 362 aaPredicted RBP16.22■□□□□ 0.19
CTSD-211ENST00000637387 FAM49BQ9NUQ9 324 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 TJP2Q9UDY2 1190 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 PCDHB7Q9Y5E2 793 aa16.22■□□□□ 0.19
CTSD-211ENST00000637387 B3GAT3O94766 335 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 CYP11A1P05108 521 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 GPD2P43304 727 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 C1QBPQ07021 282 aaKnown RBP16.21■□□□□ 0.19
CTSD-211ENST00000637387 ARHGAP17Q68EM7 881 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 LCLAT1Q6UWP7 414 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 MMS22LQ6ZRQ5 1243 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 OTOP2Q7RTS6 562 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 SLFN11Q7Z7L1 901 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 TTC30AQ86WT1 665 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 RHOT2Q8IXI1 618 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 TMEM35BQ8NCS4 154 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 TIFAQ96CG3 184 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 HEXIM2Q96MH2 286 aaKnown RBP16.21■□□□□ 0.19
CTSD-211ENST00000637387 ALS2CR12Q96Q35 445 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 RTP3Q9BQQ7 232 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 MTIF3Q9H2K0 278 aaKnown RBP16.21■□□□□ 0.19
CTSD-211ENST00000637387 NRDE2Q9H7Z3 1164 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 KANSL3Q9P2N6 904 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 CNOT8Q9UFF9 292 aaKnown RBP16.21■□□□□ 0.19
CTSD-211ENST00000637387 KIAA1257Q9ULG3 409 aa16.21■□□□□ 0.19
CTSD-211ENST00000637387 CTAGE9A4FU28 777 aa16.21■□□□□ 0.18
CTSD-211ENST00000637387 M0QYV0 167 aa16.21■□□□□ 0.18
CTSD-211ENST00000637387 BUB1BO60566 1050 aaPredicted RBP16.21■□□□□ 0.18
CTSD-211ENST00000637387 PDGFRBP09619 1106 aa16.21■□□□□ 0.18
CTSD-211ENST00000637387 CCDC130P13994 396 aa16.21■□□□□ 0.18
CTSD-211ENST00000637387 TKTP29401 623 aaKnown RBP16.21■□□□□ 0.18
CTSD-211ENST00000637387 GNL1P36915 607 aaPredicted RBP16.21■□□□□ 0.18
CTSD-211ENST00000637387 GOLGA7BQ2TAP0 167 aa16.21■□□□□ 0.18
CTSD-211ENST00000637387 PAPD7Q5XG87 772 aaKnown RBP16.21■□□□□ 0.18
CTSD-211ENST00000637387 DCLRE1AQ6PJP8 1040 aa16.21■□□□□ 0.18
CTSD-211ENST00000637387 TMEM86AQ8N2M4 240 aa16.21■□□□□ 0.18
CTSD-211ENST00000637387 MYLIPQ8WY64 445 aa16.21■□□□□ 0.18
CTSD-211ENST00000637387 RSPH1Q8WYR4 309 aa16.21■□□□□ 0.18
CTSD-211ENST00000637387 VCPIP1Q96JH7 1222 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms