RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 URI1O94763 535 aaPredicted RBP16.27■□□□□ 0.2
CLN6-219ENST00000637329 MICAL2O94851 1124 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 TIMP1P01033 207 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 CFHP08603 1231 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 FGFR1P11362 822 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 IBSPP21815 317 aaPredicted RBP16.27■□□□□ 0.2
CLN6-219ENST00000637329 GNL1P36915 607 aaPredicted RBP16.27■□□□□ 0.2
CLN6-219ENST00000637329 TERF1P54274 439 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 PTP4A2Q12974 167 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 IKBKEQ14164 716 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 DSTYKQ6XUX3 929 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 DNAAF5Q86Y56 855 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 ZNF564Q8TBZ8 553 aaPredicted RBP16.27■□□□□ 0.2
CLN6-219ENST00000637329 SUSD3Q96L08 255 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 MRPL47Q9HD33 250 aaKnown RBP16.27■□□□□ 0.2
CLN6-219ENST00000637329 MTMR10Q9NXD2 777 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 TSPAN16Q9UKR8 245 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 HYOU1Q9Y4L1 999 aa16.27■□□□□ 0.2
CLN6-219ENST00000637329 B3GAT3O94766 335 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 ATP1A1P05023 1023 aaKnown RBP16.26■□□□□ 0.19
CLN6-219ENST00000637329 PRLRP16471 622 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 TCP1P17987 556 aaKnown RBP16.26■□□□□ 0.19
CLN6-219ENST00000637329 TYMPP19971 482 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 BCAT1P54687 386 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 TAP1Q03518 808 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 RNASELQ05823 741 aaKnown RBP16.26■□□□□ 0.19
CLN6-219ENST00000637329 ORC1Q13415 861 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 WHAMMP3Q1A5X7 153 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 TCTN1Q2MV58 587 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 LRIT3Q3SXY7 679 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 MEI1Q5TIA1 1274 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 PLEKHA7Q6IQ23 1121 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 DENND1BQ6P3S1 775 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 MMS22LQ6ZRQ5 1243 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 DAAM2Q86T65 1068 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 ACOT1Q86TX2 421 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 COLGALT2Q8IYK4 626 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 B3GALNT2Q8NCR0 500 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 FAM193BQ96PV7 902 aaPredicted RBP16.26■□□□□ 0.19
CLN6-219ENST00000637329 C11orf70Q9BRQ4 267 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 NUP85Q9BW27 656 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 OSGEPQ9NPF4 335 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 PRDM6Q9NQX0 595 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 WDR35Q9P2L0 1181 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 HESX1Q9UBX0 185 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 CDC23Q9UJX2 597 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 SNX12Q9UMY4 172 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 COG5Q9UP83 839 aa16.26■□□□□ 0.19
CLN6-219ENST00000637329 ABHD14A-ACY1A0A1B0GW23 586 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 BUB1BO60566 1050 aaPredicted RBP16.25■□□□□ 0.19
CLN6-219ENST00000637329 KIF4AO95239 1232 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 PCSK1P29120 753 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 SNX16P57768 344 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 PDCLQ13371 301 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 GOLGA7BQ2TAP0 167 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 PKDCCQ504Y2 493 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 WSCD1Q658N2 575 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 Q7L0L9 218 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 DEFB128Q7Z7B8 93 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 OSTM1Q86WC4 334 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 ERICH1Q86X53 443 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 METTL23Q86XA0 190 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 LRRC43Q8N309 656 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 TMEM199Q8N511 208 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 C3orf20Q8ND61 904 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 IPO4Q8TEX9 1081 aaKnown RBP16.25■□□□□ 0.19
CLN6-219ENST00000637329 STK32AQ8WU08 396 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 CASD1Q96PB1 797 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 PAAF1Q9BRP4 392 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 TMEM175Q9BSA9 504 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 CYLDQ9NQC7 956 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 PARVAQ9NVD7 372 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 PCDHB8Q9UN66 801 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 NME7Q9Y5B8 376 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 SAR1BQ9Y6B6 198 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 LAMA3Q16787 3333 aa16.25■□□□□ 0.19
CLN6-219ENST00000637329 TTC3P53804 2025 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 CES2O00748 559 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 RIOK3O14730 519 aaKnown RBP16.24■□□□□ 0.19
CLN6-219ENST00000637329 ATMINO43313 823 aaPredicted RBP16.24■□□□□ 0.19
CLN6-219ENST00000637329 TRAPPC3O43617 180 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 BAIAP3O94812 1187 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 RRM1P23921 792 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 GPD2P43304 727 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 GABRB2P47870 512 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 BST2Q10589 180 aaKnown RBP16.24■□□□□ 0.19
CLN6-219ENST00000637329 TIGD5Q53EQ6 642 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 PPP1R26Q5T8A7 1209 aaPredicted RBP16.24■□□□□ 0.19
CLN6-219ENST00000637329 MFSD5Q6N075 450 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 WDTC1Q8N5D0 677 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 TLR10Q9BXR5 811 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 DPEP3Q9H4B8 488 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 ABCB6Q9NP58 842 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 DDX43Q9NXZ2 648 aaKnown RBP16.24■□□□□ 0.19
CLN6-219ENST00000637329 CACNG4Q9UBN1 327 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 CDH9Q9ULB4 789 aa16.24■□□□□ 0.19
CLN6-219ENST00000637329 CARNS1A5YM72 827 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 MIF4GDA9UHW6 222 aaKnown RBP16.23■□□□□ 0.19
CLN6-219ENST00000637329 ENC1O14682 589 aa16.23■□□□□ 0.19
CLN6-219ENST00000637329 DDHD2O94830 711 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms