RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MRE11P49959 708 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 CLCNKBP51801 687 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 MFAP3P55082 362 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 LILRA4P59901 499 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 UBXN1Q04323 297 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 INCA1Q0VD86 236 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 NR1I3Q14994 352 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 MAPRE1Q15691 268 aaKnown RBP7.19□□□□□ -1.26
UPF3B-205ENST00000636792 USP41Q3LFD5 358 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 PAN2Q504Q3 1202 aaKnown RBP7.19□□□□□ -1.26
UPF3B-205ENST00000636792 INTS6LQ5JSJ4 861 aaKnown RBP7.19□□□□□ -1.26
UPF3B-205ENST00000636792 PPP2R2DQ66LE6 453 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 FUT10Q6P4F1 479 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 ANKS3Q6ZW76 656 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 RTL10Q7L3V2 364 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 GAS2L3Q86XJ1 694 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 ZNF280BQ86YH2 543 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 RNF214Q8ND24 703 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 LMO3Q8TAP4 145 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 TAS1R2Q8TE23 839 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 PIK3R5Q8WYR1 880 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 ANP32BQ92688 251 aaKnown RBP7.19□□□□□ -1.26
UPF3B-205ENST00000636792 C18orf25Q96B23 403 aaPredicted RBP7.19□□□□□ -1.26
UPF3B-205ENST00000636792 PBX4Q9BYU1 374 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 INTS2Q9H0H0 1204 aaKnown RBP7.19□□□□□ -1.26
UPF3B-205ENST00000636792 RBSNQ9H1K0 784 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 TAB2Q9NYJ8 693 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 CEP72Q9P209 647 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 DNAJB4Q9UDY4 337 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 LIMD1Q9UGP4 676 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 MAFFQ9ULX9 164 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 SIK3Q9Y2K2 1263 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 PATJQ8NI35 1801 aa7.19□□□□□ -1.26
UPF3B-205ENST00000636792 CASTOR2A6NHX0 329 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 OR6C75A6NL08 312 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 TADA2AO75478 443 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 FGF18O76093 207 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 OAZ2O95190 189 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 CST3P01034 146 aaPredicted RBP7.18□□□□□ -1.26
UPF3B-205ENST00000636792 URODP06132 367 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 CA3P07451 260 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 FGFR3P22607 806 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 WARSP23381 471 aaKnown RBP7.18□□□□□ -1.26
UPF3B-205ENST00000636792 PON1P27169 355 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 ASPAP45381 313 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 GLUD2P49448 558 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 AFF1P51825 1210 aaKnown RBP7.18□□□□□ -1.26
UPF3B-205ENST00000636792 MYL6P60660 151 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 DSG1Q02413 1049 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 TAP1Q03518 808 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 YWHAHQ04917 246 aaPredicted RBP7.18□□□□□ -1.26
UPF3B-205ENST00000636792 CUL2Q13617 745 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 STILQ15468 1287 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 WDR72Q3MJ13 1102 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 LMBRD2Q68DH5 695 aaPredicted RBP7.18□□□□□ -1.26
UPF3B-205ENST00000636792 SPECC1LQ69YQ0 1117 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 FAM109BQ6ICB4 259 aaPredicted RBP7.18□□□□□ -1.26
UPF3B-205ENST00000636792 ZNF280DQ6N043 979 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 FAM117BQ6P1L5 589 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 DSTYKQ6XUX3 929 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 LYSMD3Q7Z3D4 306 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 METTL23Q86XA0 190 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 CREBRFQ8IUR6 639 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 ADGRF2Q8IZF7 708 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 ZNF397Q8NF99 534 aaPredicted RBP7.18□□□□□ -1.26
UPF3B-205ENST00000636792 NEK11Q8NG66 645 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 C2orf15Q8WU43 125 aaKnown RBP7.18□□□□□ -1.26
UPF3B-205ENST00000636792 PPP2R3CQ969Q6 453 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 TIFAQ96CG3 184 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 TNIP3Q96KP6 325 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 SENP8Q96LD8 212 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 CEP295NLQ96MC4 621 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 POP1Q99575 1024 aaKnown RBP7.18□□□□□ -1.26
UPF3B-205ENST00000636792 TRIM5Q9C035 493 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 VPS16Q9H269 839 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 GRPEL1Q9HAV7 217 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 GOLGA2P5Q9HBQ8 144 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 NGRNQ9NPE2 291 aaKnown RBP7.18□□□□□ -1.26
UPF3B-205ENST00000636792 CHST7Q9NS84 486 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 MARCH5Q9NX47 278 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 LMCD1Q9NZU5 365 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 IFNKQ9P0W0 207 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 FNIP2Q9P278 1114 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 IMPACTQ9P2X3 320 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 HSFX1Q9UBD0 423 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 CNTN6Q9UQ52 1028 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 BACE2Q9Y5Z0 518 aa7.18□□□□□ -1.26
UPF3B-205ENST00000636792 H3BNC9 293 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 GABRDO14764 452 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 B4GALT3O60512 393 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 PAEPP09466 180 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 CTSAP10619 480 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 UCHL3P15374 230 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 IBSPP21815 317 aaPredicted RBP7.17□□□□□ -1.26
UPF3B-205ENST00000636792 ANXA13P27216 316 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 GATMP50440 423 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 BPIFB4P59827 614 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 MRPL58Q14197 206 aaKnown RBP7.17□□□□□ -1.26
UPF3B-205ENST00000636792 SYCP1Q15431 976 aa7.17□□□□□ -1.26
UPF3B-205ENST00000636792 PTPROQ16827 1216 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms