RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 SPPL2BQ8TCT7 592 aa19.74■□□□□ 0.75
CLN6-214ENST00000636314 C2orf15Q8WU43 125 aaKnown RBP19.74■□□□□ 0.75
CLN6-214ENST00000636314 CCDC127Q96BQ5 260 aa19.74■□□□□ 0.75
CLN6-214ENST00000636314 NELL2Q99435 816 aa19.74■□□□□ 0.75
CLN6-214ENST00000636314 CGRRF1Q99675 332 aa19.74■□□□□ 0.75
CLN6-214ENST00000636314 DNAJC25Q9H1X3 360 aa19.74■□□□□ 0.75
CLN6-214ENST00000636314 GOLPH3LQ9H4A5 285 aa19.74■□□□□ 0.75
CLN6-214ENST00000636314 HEBP1Q9NRV9 189 aa19.74■□□□□ 0.75
CLN6-214ENST00000636314 GDAP2Q9NXN4 497 aa19.74■□□□□ 0.75
CLN6-214ENST00000636314 ABI2Q9NYB9 513 aaPredicted RBP19.74■□□□□ 0.75
CLN6-214ENST00000636314 SMG5Q9UPR3 1016 aaKnown RBP19.74■□□□□ 0.75
CLN6-214ENST00000636314 SOAT2O75908 522 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 PRR29P0C7W0 189 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 TUFMP49411 452 aaKnown RBP19.73■□□□□ 0.75
CLN6-214ENST00000636314 CDR1P51861 262 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 MYL7Q01449 175 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 VEPH1Q14D04 833 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 SCARA3Q6AZY7 606 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 ZNF852Q6ZMS4 543 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 KRBA2Q6ZNG9 492 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 ITIH5Q86UX2 942 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 ADGRF2Q8IZF7 708 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 TOP6BLQ8N6T0 577 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 FAM200AQ8TCP9 573 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 HPDLQ96IR7 371 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 DDX43Q9NXZ2 648 aaKnown RBP19.73■□□□□ 0.75
CLN6-214ENST00000636314 MRPS17Q9Y2R5 130 aaKnown RBP19.73■□□□□ 0.75
CLN6-214ENST00000636314 ASB3Q9Y575 518 aa19.73■□□□□ 0.75
CLN6-214ENST00000636314 GJA1P17302 382 aa19.72■□□□□ 0.75
CLN6-214ENST00000636314 TANGO2Q6ICL3 276 aa19.72■□□□□ 0.75
CLN6-214ENST00000636314 TRAPPC11Q7Z392 1133 aa19.72■□□□□ 0.75
CLN6-214ENST00000636314 LRRTM3Q86VH5 581 aa19.72■□□□□ 0.75
CLN6-214ENST00000636314 TMC8Q8IU68 726 aa19.72■□□□□ 0.75
CLN6-214ENST00000636314 GPR161Q8N6U8 529 aaKnown RBP19.72■□□□□ 0.75
CLN6-214ENST00000636314 ZBTB44Q8NCP5 570 aa19.72■□□□□ 0.75
CLN6-214ENST00000636314 SPATA18Q8TC71 538 aa19.72■□□□□ 0.75
CLN6-214ENST00000636314 PSMG2Q969U7 264 aa19.72■□□□□ 0.75
CLN6-214ENST00000636314 CLDN23Q96B33 292 aa19.72■□□□□ 0.75
CLN6-214ENST00000636314 CCDC34Q96HJ3 373 aa19.72■□□□□ 0.75
CLN6-214ENST00000636314 SLITRK6Q9H5Y7 841 aa19.72■□□□□ 0.75
CLN6-214ENST00000636314 GPR179Q6PRD1 2367 aa19.72■□□□□ 0.75
CLN6-214ENST00000636314 NCOR2Q9Y618 2525 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 NRG2O14511 850 aaPredicted RBP19.71■□□□□ 0.75
CLN6-214ENST00000636314 MOSPD3O75425 235 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 ZNF202O95125 648 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 SDHBP21912 280 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 RPS9P46781 194 aaKnown RBP19.71■□□□□ 0.75
CLN6-214ENST00000636314 DPYDQ12882 1025 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 TEAD2Q15562 447 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 NFE2Q16621 373 aaPredicted RBP19.71■□□□□ 0.75
CLN6-214ENST00000636314 FAM78AQ5JUQ0 283 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 SHKBP1Q8TBC3 707 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 ELSPBP1Q96BH3 223 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 LPIN3Q9BQK8 851 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 ACBD6Q9BR61 282 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 LRRC3Q9BY71 257 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 EPC1Q9H2F5 836 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 USP18Q9UMW8 372 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 NDRG2Q9UN36 371 aaKnown RBP19.71■□□□□ 0.75
CLN6-214ENST00000636314 PCDHB5Q9Y5E4 795 aa19.71■□□□□ 0.75
CLN6-214ENST00000636314 A0A1W2PRU2 124 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 GOLGA6L4A6NEF3 574 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 LILRB5O75023 590 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 KIF20AO95235 890 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 ATF6P18850 670 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 ACAT1P24752 427 aaKnown RBP19.7■□□□□ 0.74
CLN6-214ENST00000636314 PCSK1P29120 753 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 LHX1P48742 406 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 GRM2Q14416 872 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 SOWAHAQ2M3V2 549 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 INTS6LQ5JSJ4 861 aaKnown RBP19.7■□□□□ 0.74
CLN6-214ENST00000636314 POTEHQ6S545 545 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 DPH6Q7L8W6 267 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 DNAJB7Q7Z6W7 309 aaPredicted RBP19.7■□□□□ 0.74
CLN6-214ENST00000636314 ASB16Q96NS5 453 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 KCTD10Q9H3F6 313 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 BRD9Q9H8M2 597 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 ZFP14Q9HCL3 533 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 PRMT8Q9NR22 394 aaPredicted RBP19.7■□□□□ 0.74
CLN6-214ENST00000636314 TMLHEQ9NVH6 421 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 CDV3Q9UKY7 258 aaKnown RBP19.7■□□□□ 0.74
CLN6-214ENST00000636314 COL4A2P08572 1712 aa19.7■□□□□ 0.74
CLN6-214ENST00000636314 PDXKO00764 312 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 RHOBTB3O94955 611 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 FGF19O95750 216 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 NR3C1P04150 777 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 HAPLN1P10915 354 aaPredicted RBP19.69■□□□□ 0.74
CLN6-214ENST00000636314 FCARP24071 287 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 ATXN1P54253 815 aaKnown RBP19.69■□□□□ 0.74
CLN6-214ENST00000636314 MTAPQ13126 283 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 TRPC3Q13507 836 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 TAF12Q16514 161 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 OSTM1Q86WC4 334 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 SLC9A9Q8IVB4 645 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 ZSCAN18Q8TBC5 510 aaPredicted RBP19.69■□□□□ 0.74
CLN6-214ENST00000636314 DNASE1L2Q92874 299 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 SMARCD2Q92925 531 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 ZSWIM3Q96MP5 696 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 GCNAQ96QF7 691 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 GPR88Q9GZN0 384 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms