RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SNRNP35Q16560 246 aaKnown RBP19.24■□□□□ 0.67
PNKP-225ENST00000636214 ARHGAP29Q52LW3 1261 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 INTS6LQ5JSJ4 861 aaKnown RBP19.24■□□□□ 0.67
PNKP-225ENST00000636214 SPATA2LQ8IUW3 424 aaPredicted RBP19.24■□□□□ 0.67
PNKP-225ENST00000636214 WDR49Q8IV35 697 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 ZNF507Q8TCN5 953 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 LEO1Q8WVC0 666 aaPredicted RBP19.24■□□□□ 0.67
PNKP-225ENST00000636214 CLDN23Q96B33 292 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 HPDLQ96IR7 371 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 BLZF1Q9H2G9 400 aa19.24■□□□□ 0.67
PNKP-225ENST00000636214 THG1LQ9NWX6 298 aaKnown RBP19.24■□□□□ 0.67
PNKP-225ENST00000636214 MAGED2Q9UNF1 606 aaPredicted RBP19.24■□□□□ 0.67
PNKP-225ENST00000636214 CLSTN1O94985 981 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 ACAT1P24752 427 aaKnown RBP19.23■□□□□ 0.67
PNKP-225ENST00000636214 DDX6P26196 483 aaKnown RBP eCLIP19.23■□□□□ 0.67
PNKP-225ENST00000636214 CYP2J2P51589 502 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 PLCB2Q00722 1185 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 DNM1Q05193 864 aaKnown RBP19.23■□□□□ 0.67
PNKP-225ENST00000636214 ZNF528Q3MIS6 628 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 RESP18Q5W5W9 173 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 GPIHBP1Q8IV16 184 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 XXYLT1Q8NBI6 393 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 RDH13Q8NBN7 331 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 ATRIPQ8WXE1 791 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 MRPS31Q92665 395 aaKnown RBP19.23■□□□□ 0.67
PNKP-225ENST00000636214 MMS19Q96T76 1030 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 IER2Q9BTL4 223 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 C8orf33Q9H7E9 229 aaPredicted RBP19.23■□□□□ 0.67
PNKP-225ENST00000636214 ABCB6Q9NP58 842 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 AGPAT3Q9NRZ7 376 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 CGNQ9P2M7 1197 aaKnown RBP19.23■□□□□ 0.67
PNKP-225ENST00000636214 UXTQ9UBK9 157 aaPredicted RBP19.23■□□□□ 0.67
PNKP-225ENST00000636214 SIX4Q9UIU6 781 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 SPTBN4Q9H254 2564 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 PATJQ8NI35 1801 aa19.23■□□□□ 0.67
PNKP-225ENST00000636214 PVALEFA0A1B0GWK0 134 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 CLIC2O15247 247 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 FCHO2Q0JRZ9 810 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 LRRC32Q14392 662 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 C4orf50Q6ZRC1 276 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 EPM2AIP1Q7L775 607 aaPredicted RBP19.22■□□□□ 0.67
PNKP-225ENST00000636214 DPH6Q7L8W6 267 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 OR5B17Q8NGF7 314 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 BPIFB1Q8TDL5 484 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 FAM84AQ96KN4 292 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 SLC39A2Q9NP94 309 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 EXOC1Q9NV70 894 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 TMLHEQ9NVH6 421 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 FANCMQ8IYD8 2048 aa19.22■□□□□ 0.67
PNKP-225ENST00000636214 CCNE1P24864 410 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 WEE1P30291 646 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 MLLT6P55198 1093 aaPredicted RBP19.21■□□□□ 0.67
PNKP-225ENST00000636214 TRPC3Q13507 836 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 MAPRE1Q15691 268 aaKnown RBP19.21■□□□□ 0.67
PNKP-225ENST00000636214 SCN4BQ8IWT1 228 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 CELF5Q8N6W0 485 aaKnown RBP19.21■□□□□ 0.67
PNKP-225ENST00000636214 GOLGA5Q8TBA6 731 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 SCFD1Q8WVM8 642 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 CCDC127Q96BQ5 260 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 RSPRY1Q96DX4 576 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 FUBP3Q96I24 572 aaKnown RBP eCLIP19.21■□□□□ 0.67
PNKP-225ENST00000636214 CGRRF1Q99675 332 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 SYT15Q9BQS2 421 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 IL21Q9HBE4 155 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 GTF3C4Q9UKN8 822 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 PCDHGA2Q9Y5H1 932 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 WDR87Q6ZQQ6 2873 aa19.21■□□□□ 0.67
PNKP-225ENST00000636214 SLC38A8A6NNN8 435 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 EXOC3O60645 756 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 CYP2F1P24903 491 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 CASP1P29466 404 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 NLRP12P59046 1061 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 TNNC1P63316 161 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 KRT85P78386 507 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 PKP1Q13835 747 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 DDR2Q16832 855 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 SOWAHAQ2M3V2 549 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 TRAPPC11Q7Z392 1133 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 OSTM1Q86WC4 334 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 CMTM8Q8IZV2 173 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 MAB21L3Q8N8X9 362 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 CXorf38Q8TB03 319 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 MKNK1Q9BUB5 465 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 CHRDQ9H2X0 955 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 SNX25Q9H3E2 840 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 KIF9Q9HAQ2 790 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 LMAN1LQ9HAT1 526 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 ZSCAN32Q9NX65 697 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 CDH9Q9ULB4 789 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 DMDP11532 3685 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 NCANO14594 1321 aa19.2■□□□□ 0.66
PNKP-225ENST00000636214 TGFB1I1O43294 461 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 PHACTR2O75167 634 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 PRAMEF12O95522 483 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 SLFN14P0C7P3 912 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 ANXA13P27216 316 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 HOXD13P35453 343 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 GPR15P49685 360 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 CCR3P51677 355 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 CYP24A1Q07973 514 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms