RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 TJP2Q9UDY2 1190 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 TRAPPC3O43617 180 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 GYPCP04921 128 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 PLEKP08567 350 aaPredicted RBP9.09□□□□□ -0.95
CDKL5-209ENST00000635828 KRT5P13647 590 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 FOSL2P15408 326 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 BDNFP23560 247 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 ADORA2BP29275 332 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 ATICP31939 592 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 CLCN1P35523 988 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 SLC20A1Q8WUM9 679 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 TRIM5Q9C035 493 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 TLE6Q9H808 572 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 PCDHB4Q9Y5E5 795 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 ADKP55263 362 aaKnown RBP9.09□□□□□ -0.95
CDKL5-209ENST00000635828 KCNC3Q14003 757 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 SMC1AQ14683 1233 aaKnown RBP9.09□□□□□ -0.95
CDKL5-209ENST00000635828 PASD1Q8IV76 773 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 TOP6BLQ8N6T0 577 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 SPC24Q8NBT2 197 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 B3GALNT2Q8NCR0 500 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 SLC2A14Q8TDB8 520 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 NDRG1Q92597 394 aaKnown RBP9.09□□□□□ -0.95
CDKL5-209ENST00000635828 MYLPFQ96A32 169 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 SYT15Q9BQS2 421 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 B3GNT5Q9BYG0 378 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 IMPG2Q9BZV3 1241 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 TTYH3Q9C0H2 523 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 RWDD3Q9Y3V2 267 aa9.09□□□□□ -0.95
CDKL5-209ENST00000635828 MTMR11A4FU01 709 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 SYN3O14994 580 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 GFPT2O94808 682 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 NTHL1P78549 312 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 SLC8B1Q6J4K2 584 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 TMC5Q6UXY8 1006 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 GPRIN1Q7Z2K8 1008 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 FUKQ8N0W3 1084 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 UBA3Q8TBC4 463 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 GIPC2Q8TF65 315 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 ERGIC2Q96RQ1 377 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 ZCWPW1Q9H0M4 648 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 CLEC1BQ9P126 229 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 LZTS1Q9Y250 596 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 PMM2O15305 246 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 STX10O60499 249 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 STAU1O95793 577 aaKnown RBP9.08□□□□□ -0.96
CDKL5-209ENST00000635828 SKILP12757 684 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 PTPN1P18031 435 aaKnown RBP9.08□□□□□ -0.96
CDKL5-209ENST00000635828 ATF6P18850 670 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 WARSP23381 471 aaKnown RBP9.08□□□□□ -0.96
CDKL5-209ENST00000635828 INTS6LQ5JSJ4 861 aaKnown RBP9.08□□□□□ -0.96
CDKL5-209ENST00000635828 TAF3Q5VWG9 929 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 LILRA6Q6PI73 481 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 ANKS3Q6ZW76 656 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 SLC7A14Q8TBB6 771 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 BAP1Q92560 729 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 SNX25Q9H3E2 840 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 MAN1C1Q9NR34 630 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 CLDND1Q9NY35 253 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 SPEGQ15772 3267 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 ZNF638Q14966 1978 aaKnown RBP9.08□□□□□ -0.96
CDKL5-209ENST00000635828 LRRC53A6NM62 1247 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 F8VZ95 297 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 TACC1O75410 805 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 GABBR2O75899 941 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 GJA1P17302 382 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 CASP14P31944 242 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 INCA1Q0VD86 236 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 IFRD2Q12894 506 aaPredicted RBP9.08□□□□□ -0.96
CDKL5-209ENST00000635828 FKBP15Q5T1M5 1219 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 ZNF280DQ6N043 979 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 RBBP8NLQ8NC74 664 aaPredicted RBP9.08□□□□□ -0.96
CDKL5-209ENST00000635828 HEXIM2Q96MH2 286 aaKnown RBP9.08□□□□□ -0.96
CDKL5-209ENST00000635828 TSPAN18Q96SJ8 248 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 SEPT5Q99719 369 aaPredicted RBP9.08□□□□□ -0.96
CDKL5-209ENST00000635828 CYP4F11Q9HBI6 524 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 RXFP1Q9HBX9 757 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 CYTH4Q9UIA0 394 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 IRAK3Q9Y616 596 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 GREB1Q4ZG55 1949 aa9.08□□□□□ -0.96
CDKL5-209ENST00000635828 GTPBP10A4D1E9 387 aaKnown RBP9.07□□□□□ -0.96
CDKL5-209ENST00000635828 P4HA2O15460 535 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 CCL16O15467 120 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 ADCY5O95622 1261 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 JAM2P57087 298 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 USP46P62068 366 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 ENPEPQ07075 957 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 SKIV2LQ15477 1246 aaKnown RBP9.07□□□□□ -0.96
CDKL5-209ENST00000635828 FAM171BQ6P995 826 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 TTC30AQ86WT1 665 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 ZMIZ2Q8NF64 920 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 OLIG1Q8TAK6 271 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 SAMD11Q96NU1 681 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 TCF20Q9UGU0 1960 aaKnown RBP9.07□□□□□ -0.96
CDKL5-209ENST00000635828 FSD2A1L4K1 749 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 ABLIM3O94929 683 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 CAVIN2O95810 425 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 TRIM21P19474 475 aaKnown RBP9.07□□□□□ -0.96
CDKL5-209ENST00000635828 TYMPP19971 482 aa9.07□□□□□ -0.96
CDKL5-209ENST00000635828 ZNF75DP51815 510 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms