RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 NEUROG2Q9H2A3 272 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 OCM2P0CE71 109 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 OCMP0CE72 109 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-211ENST00000635193 SULT1E1P49888 294 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 ROR2Q01974 943 aaKnown RBP12.16□□□□□ -0.46
COL11A1-211ENST00000635193 PLEKHM3Q6ZWE6 761 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 AENQ8WTP8 325 aaKnown RBP12.16□□□□□ -0.46
COL11A1-211ENST00000635193 VPS50Q96JG6 964 aa12.16□□□□□ -0.46
COL11A1-211ENST00000635193 SPATA31A3Q5VYP0 1347 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 BLVRAP53004 296 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 PDAP1Q13442 181 aaKnown RBP12.15□□□□□ -0.46
COL11A1-211ENST00000635193 TRIM25Q14258 630 aaKnown RBP12.15□□□□□ -0.46
COL11A1-211ENST00000635193 EFHC1Q5JVL4 640 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 C16orf86Q6ZW13 317 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 CCDC80Q76M96 950 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 P3H2Q8IVL5 708 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 SCN4BQ8IWT1 228 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 STK32AQ8WU08 396 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 WDR60Q8WVS4 1066 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 ELMO2Q96JJ3 720 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 ZFRQ96KR1 1074 aaKnown RBP12.15□□□□□ -0.46
COL11A1-211ENST00000635193 JPH1Q9HDC5 661 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-211ENST00000635193 MYO1GB0I1T2 1018 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 PSTPIP1O43586 416 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 ECE2O60344 883 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 PRKCBP05771 671 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 POLBP06746 335 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 RGS7P49802 495 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 SNRPFP62306 86 aaKnown RBP12.15□□□□□ -0.46
COL11A1-211ENST00000635193 DCTN2Q13561 401 aaKnown RBP12.15□□□□□ -0.46
COL11A1-211ENST00000635193 SZRD1Q7Z422 152 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 CLEC10AQ8IUN9 316 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 PTPRN2Q92932 1015 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 GLMNQ92990 594 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 TAGLN3Q9UI15 199 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 LRFN2Q9ULH4 789 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 SALL3Q9BXA9 1300 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 MAP2K7O14733 419 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 MOCS2O96007 188 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-211ENST00000635193 KRT72Q14CN4 511 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 CCDC142Q17RM4 750 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 COBLL1Q53SF7 1204 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 C6orf10Q5SRN2 563 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 KIAA1841Q6NSI8 718 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 OLFML1Q6UWY5 402 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 NANOGNBQ7Z5D8 188 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 KCTD17Q8N5Z5 321 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 RNF149Q8NC42 400 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 EPAS1Q99814 870 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 KCND1Q9NSA2 647 aa12.15□□□□□ -0.46
COL11A1-211ENST00000635193 A0A0A6YYK5 440 aaPredicted RBP12.15□□□□□ -0.47
COL11A1-211ENST00000635193 FOXN3O00409 490 aaPredicted RBP12.15□□□□□ -0.47
COL11A1-211ENST00000635193 PECAM1P16284 738 aaPredicted RBP12.15□□□□□ -0.47
COL11A1-211ENST00000635193 CDC25CP30307 473 aa12.15□□□□□ -0.47
COL11A1-211ENST00000635193 CIAPIN1Q6FI81 312 aa12.15□□□□□ -0.47
COL11A1-211ENST00000635193 KDELC2Q7Z4H8 507 aa12.15□□□□□ -0.47
COL11A1-211ENST00000635193 YTHDF3Q7Z739 585 aaKnown RBP12.15□□□□□ -0.47
COL11A1-211ENST00000635193 ATP8B4Q8TF62 1192 aa12.15□□□□□ -0.47
COL11A1-211ENST00000635193 VPS33BQ9H267 617 aa12.15□□□□□ -0.47
COL11A1-211ENST00000635193 PLEKHA5Q9HAU0 1116 aa12.15□□□□□ -0.47
COL11A1-211ENST00000635193 TSR3Q9UJK0 312 aaKnown RBP12.15□□□□□ -0.47
COL11A1-211ENST00000635193 CCDC78A2IDD5 438 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 ASNA1O43681 348 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 SLC37A4O43826 429 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 PSMA4P25789 261 aaKnown RBP12.14□□□□□ -0.47
COL11A1-211ENST00000635193 ALDH5A1P51649 535 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-211ENST00000635193 STILQ15468 1287 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 LRRC74BQ6ZQY2 392 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 HDAC7Q8WUI4 952 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 KRT35Q92764 455 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 TSPAN17Q96FV3 270 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 PI4K2AQ9BTU6 479 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 MRPS26Q9BYN8 205 aaKnown RBP12.14□□□□□ -0.47
COL11A1-211ENST00000635193 FRMD8Q9BZ67 464 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-211ENST00000635193 JMJD4Q9H9V9 463 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 AGPAT3Q9NRZ7 376 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 ATAD3AQ9NVI7 634 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 ARIH1Q9Y4X5 557 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-211ENST00000635193 TPST1O60507 370 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 CYP11B2P19099 503 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 HSD17B4P51659 736 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 TWF2Q6IBS0 349 aaKnown RBP12.14□□□□□ -0.47
COL11A1-211ENST00000635193 LAYNQ6UX15 382 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 FAM81AQ8TBF8 368 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 RMI1Q9H9A7 625 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 METTL5Q9NRN9 209 aaKnown RBP12.14□□□□□ -0.47
COL11A1-211ENST00000635193 ARHGEF38Q9NXL2 777 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 TMA7Q9Y2S6 64 aaKnown RBP12.14□□□□□ -0.47
COL11A1-211ENST00000635193 SNX13Q9Y5W8 968 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 ZSCAN5CA6NGD5 496 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-211ENST00000635193 PSMD3O43242 534 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 SOX11P35716 441 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 GPAT2Q6NUI2 795 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 ZNF571Q7Z3V5 609 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-211ENST00000635193 TRIM69Q86WT6 500 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 MTMR8Q96EF0 704 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 CASS4Q9NQ75 786 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 ZBTB24O43167 697 aaPredicted RBP12.14□□□□□ -0.47
COL11A1-211ENST00000635193 SGPL1O95470 568 aa12.14□□□□□ -0.47
COL11A1-211ENST00000635193 GSTT1P30711 240 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms