RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 CPNE8Q86YQ8 564 aa15.07■□□□□ 0
LIMS4-204ENST00000632897 NIPA2Q8N8Q9 360 aa15.07■□□□□ 0
LIMS4-204ENST00000632897 SMG8Q8ND04 991 aaKnown RBP15.07■□□□□ 0
LIMS4-204ENST00000632897 C18orf25Q96B23 403 aaPredicted RBP15.07■□□□□ 0
LIMS4-204ENST00000632897 HEXIM2Q96MH2 286 aaKnown RBP15.07■□□□□ 0
LIMS4-204ENST00000632897 MIS12Q9H081 205 aa15.07■□□□□ 0
LIMS4-204ENST00000632897 EPB41L5Q9HCM4 733 aa15.07■□□□□ 0
LIMS4-204ENST00000632897 NR2E3Q9Y5X4 410 aa15.07■□□□□ 0
LIMS4-204ENST00000632897 FAM187AA6NFU0 413 aa15.06■□□□□ 0
LIMS4-204ENST00000632897 CHRNA3P32297 505 aa15.06■□□□□ 0
LIMS4-204ENST00000632897 GABRB2P47870 512 aa15.06■□□□□ 0
LIMS4-204ENST00000632897 MRPS25P82663 173 aaKnown RBP15.06■□□□□ 0
LIMS4-204ENST00000632897 PIGHQ14442 188 aaPredicted RBP15.06■□□□□ 0
LIMS4-204ENST00000632897 ZNF268Q14587 947 aaPredicted RBP15.06■□□□□ 0
LIMS4-204ENST00000632897 PTPN20Q4JDL3 420 aa15.06■□□□□ 0
LIMS4-204ENST00000632897 LRRC38Q5VT99 294 aa15.06■□□□□ 0
LIMS4-204ENST00000632897 DCUN1D2Q6PH85 259 aa15.06■□□□□ 0
LIMS4-204ENST00000632897 KATNAL2Q8IYT4 538 aa15.06■□□□□ 0
LIMS4-204ENST00000632897 DPF3Q92784 378 aa15.06■□□□□ 0
LIMS4-204ENST00000632897 DDX27Q96GQ7 796 aaKnown RBP15.06■□□□□ 0
LIMS4-204ENST00000632897 UBXN6Q9BZV1 441 aa15.06■□□□□ 0
LIMS4-204ENST00000632897 CXCL16Q9H2A7 254 aa15.06■□□□□ 0
LIMS4-204ENST00000632897 GDAP2Q9NXN4 497 aa15.06■□□□□ 0
LIMS4-204ENST00000632897 SNX9Q9Y5X1 595 aa15.06■□□□□ 0
LIMS4-204ENST00000632897 SIGLEC16A6NMB1 481 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 M0QYV0 167 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 FSCN2O14926 492 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 GPR182O15218 404 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 SETSIPP0DME0 302 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 ELNP15502 786 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 SV2CQ496J9 727 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 GLRA4Q5JXX5 417 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 FBXO47Q5MNV8 452 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 GSPT2Q8IYD1 628 aaKnown RBP15.05■□□□□ -0
LIMS4-204ENST00000632897 C12orf50Q8NA57 414 aaPredicted RBP15.05■□□□□ -0
LIMS4-204ENST00000632897 IPO4Q8TEX9 1081 aaKnown RBP15.05■□□□□ -0
LIMS4-204ENST00000632897 FNIP1Q8TF40 1166 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 CASKIN2Q8WXE0 1202 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 SEC14L1Q92503 715 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 C18orf8Q96DM3 657 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 MCEEQ96PE7 176 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 RAB17Q9H0T7 212 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 UNC93B1Q9H1C4 597 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 RNF39Q9H2S5 420 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 DDX20Q9UHI6 824 aaKnown RBP15.05■□□□□ -0
LIMS4-204ENST00000632897 AMACRQ9UHK6 382 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 RASAL2Q9UJF2 1139 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 ST3GAL5Q9UNP4 418 aa15.05■□□□□ -0
LIMS4-204ENST00000632897 PPEF2O14830 753 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 CHRNA1P02708 482 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 FAM163BP0C2L3 166 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 LRPAP1P30533 357 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 CETN2P41208 172 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 GPD2P43304 727 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 FNTAP49354 379 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 CARSP49589 748 aaKnown RBP15.04■□□□□ -0
LIMS4-204ENST00000632897 TAF6P49848 677 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 PSMC1P62191 440 aaKnown RBP15.04■□□□□ -0
LIMS4-204ENST00000632897 RPL7AP62424 266 aaKnown RBP15.04■□□□□ -0
LIMS4-204ENST00000632897 DR1Q01658 176 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 PTK7Q13308 1070 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 PDCLQ13371 301 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 ORC1Q13415 861 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 SMC1AQ14683 1233 aaKnown RBP15.04■□□□□ -0
LIMS4-204ENST00000632897 AADACL2Q6P093 401 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 SND1Q7KZF4 910 aaKnown RBP eCLIP15.04■□□□□ -0
LIMS4-204ENST00000632897 LIMS2Q7Z4I7 341 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 RNF180Q86T96 592 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 PRELID2Q8N945 189 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 EXD1Q8NHP7 514 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 MRPL45Q9BRJ2 306 aaKnown RBP15.04■□□□□ -0
LIMS4-204ENST00000632897 SYNCQ9H7C4 482 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 FAM114A2Q9NRY5 505 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 SLC38A7Q9NVC3 462 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 KLK14Q9P0G3 267 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 PCYOX1Q9UHG3 505 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 CYTH4Q9UIA0 394 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 HPCAL4Q9UM19 191 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 UTP11Q9Y3A2 253 aaKnown RBP15.04■□□□□ -0
LIMS4-204ENST00000632897 NR2E1Q9Y466 385 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 TRIP11Q15643 1979 aa15.04■□□□□ -0
LIMS4-204ENST00000632897 CBX1P83916 185 aa15.03■□□□□ -0
LIMS4-204ENST00000632897 SIX1Q15475 284 aaPredicted RBP15.03■□□□□ -0
LIMS4-204ENST00000632897 PTGISQ16647 500 aa15.03■□□□□ -0
LIMS4-204ENST00000632897 CYP4A22Q5TCH4 519 aa15.03■□□□□ -0
LIMS4-204ENST00000632897 ARHGAP17Q68EM7 881 aa15.03■□□□□ -0
LIMS4-204ENST00000632897 XYLT1Q86Y38 959 aa15.03■□□□□ -0
LIMS4-204ENST00000632897 MREGQ8N565 214 aa15.03■□□□□ -0
LIMS4-204ENST00000632897 IFT81Q8WYA0 676 aa15.03■□□□□ -0
LIMS4-204ENST00000632897 WNT8BQ93098 351 aa15.03■□□□□ -0
LIMS4-204ENST00000632897 MAGOHBQ96A72 148 aaKnown RBP15.03■□□□□ -0
LIMS4-204ENST00000632897 MCRS1Q96EZ8 462 aa15.03■□□□□ -0
LIMS4-204ENST00000632897 RBM41Q96IZ5 413 aaKnown RBP15.03■□□□□ -0
LIMS4-204ENST00000632897 PPP1R10Q96QC0 940 aaKnown RBP15.03■□□□□ -0
LIMS4-204ENST00000632897 CPXM1Q96SM3 734 aa15.03■□□□□ -0
LIMS4-204ENST00000632897 ERVK-5Q9HDB9 667 aa15.03■□□□□ -0
LIMS4-204ENST00000632897 FAM105AQ9NUU6 356 aa15.03■□□□□ -0
LIMS4-204ENST00000632897 ESYT3A0FGR9 886 aa15.02■□□□□ -0
LIMS4-204ENST00000632897 ZSCAN5CA6NGD5 496 aaPredicted RBP15.02■□□□□ -0
LIMS4-204ENST00000632897 KPNA7A9QM74 516 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms