RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 HLTFQ14527 1009 aaKnown RBP eCLIP13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 EPC2Q52LR7 807 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 ELMOD1Q8N336 334 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 LRRC57Q8N9N7 239 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 CCDC26Q8TAB7 109 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 MFSD14AQ96MC6 490 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 TBC1D13Q9NVG8 400 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 DDX43Q9NXZ2 648 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 TMEM59LQ9UK28 342 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 USTQ9Y2C2 406 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 SF3B1O75533 1304 aaKnown RBP eCLIP13.19□□□□□ -0.39e-9■■■■■ 62.4
SYNGAP1-207ENST00000628646 MEIS3P2A8K0S8 358 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 LAG3P18627 525 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 ATICP31939 592 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 CLCNKBP51801 687 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 VEPH1Q14D04 833 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 IFT20Q8IY31 132 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 PGLYRP2Q96PD5 576 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 CCDC113Q9H0I3 377 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 SPG21Q9NZD8 308 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 OPA1O60313 960 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 TNFRSF8P28908 595 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 PPM1AP35813 382 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 RBM12Q9NTZ6 932 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 AMFRQ9UKV5 643 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 H7C4K7 107 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 PALMO75781 387 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 WSCD1Q658N2 575 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 PPP2R2DQ66LE6 453 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 DNAAF5Q86Y56 855 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 CALR3Q96L12 384 aaKnown RBP13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 IGFLR1Q9H665 355 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 RGS18Q9NS28 235 aa13.19□□□□□ -0.3
SYNGAP1-207ENST00000628646 DOCK5Q9H7D0 1870 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 TRIM43BA6NCK2 446 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 PIK3R2O00459 728 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 HSF2BPO75031 334 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 KLRC2P26717 231 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 RPL9P32969 192 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 ZACNQ401N2 412 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 PLEKHG4Q58EX7 1191 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 DCLRE1AQ6PJP8 1040 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 TMEM35BQ8NCS4 154 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 RUBCNQ92622 972 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 TRIM43Q96BQ3 446 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 STK33Q9BYT3 514 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 CISHQ9NSE2 258 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 TBX21Q9UL17 535 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 PLXNA1Q9UIW2 1896 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 SOX5P35711 763 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 MLLT1Q03111 559 aaPredicted RBP13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 ALKBH5Q6P6C2 394 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 UROC1Q96N76 676 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 GCNAQ96QF7 691 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 PSMB7Q99436 277 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 MIS12Q9H081 205 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 RASAL2Q9UJF2 1139 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 DSEQ9UL01 958 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 MAPK13O15264 365 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 MGEA5O60502 916 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 MRPS25P82663 173 aaKnown RBP13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 C9orf57Q5W0N0 161 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 ERICH1Q86X53 443 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 PALB2Q86YC2 1186 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 EFCAB13Q8IY85 973 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 UBL4BQ8N7F7 174 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 SLC30A5Q8TAD4 765 aa13.18□□□□□ -0.3
SYNGAP1-207ENST00000628646 GTPBP10A4D1E9 387 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 RGS7P49802 495 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 MCCD1P59942 119 aaPredicted RBP13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 ADAM17P78536 824 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 DEFB103AP81534 67 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 AGMOQ6ZNB7 445 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 C1orf127Q8N9H9 656 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 FAM71BQ8TC56 605 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 TMEM174Q8WUU8 243 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 HINFPQ9BQA5 517 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 MRPL17Q9NRX2 175 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 NEBLO76041 1014 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 LHX1P48742 406 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 RABGGTBP53611 331 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 ZNF354CQ86Y25 554 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 SMYD3Q9H7B4 428 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 ERICH4A6NGS2 130 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 FOXN3O00409 490 aaPredicted RBP13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 CST3P01034 146 aaPredicted RBP13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 BRD2P25440 801 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 HNRNPH2P55795 449 aaKnown RBP13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 CHRDL2Q6WN34 429 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 C4orf50Q6ZRC1 276 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 FAM161BQ96MY7 647 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 SYT15Q9BQS2 421 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 WNT8AQ9H1J5 351 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 NAGPAQ9UK23 515 aa13.17□□□□□ -0.3
SYNGAP1-207ENST00000628646 NDST1P52848 882 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 USP41Q3LFD5 358 aa13.16□□□□□ -0.3
SYNGAP1-207ENST00000628646 SCYL2Q6P3W7 929 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms