RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 GIPC2Q8TF65 315 aa18.44■□□□□ 0.54
SPTAN1-214ENST00000628614 CCDC47Q96A33 483 aaKnown RBP18.44■□□□□ 0.54
SPTAN1-214ENST00000628614 PI4K2AQ9BTU6 479 aa18.44■□□□□ 0.54
SPTAN1-214ENST00000628614 TRPV5Q9NQA5 729 aa18.44■□□□□ 0.54
SPTAN1-214ENST00000628614 DLGAP2Q9P1A6 1054 aa18.44■□□□□ 0.54
SPTAN1-214ENST00000628614 ZMYM5Q9UJ78 669 aa18.44■□□□□ 0.54
SPTAN1-214ENST00000628614 USP34Q70CQ2 3546 aa18.44■□□□□ 0.54
SPTAN1-214ENST00000628614 DMDP11532 3685 aa18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 HEPACAM2A8MVW5 462 aa18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 NBL1P41271 181 aa18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 UBXN2BQ14CS0 331 aa18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 STXBP5Q5T5C0 1151 aa18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 GPR158Q5T848 1215 aa18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 YAF2Q8IY57 180 aa18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 FSIP1Q8NA03 581 aa18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 FUBP3Q96I24 572 aaKnown RBP eCLIP18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 PKMYT1Q99640 499 aa18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 LTB4R2Q9NPC1 389 aa18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 HEBP1Q9NRV9 189 aa18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 MRPS17Q9Y2R5 130 aaKnown RBP18.43■□□□□ 0.54
SPTAN1-214ENST00000628614 PROB1E7EW31 1015 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 DPYSL4O14531 572 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 ZNF263O14978 683 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 KIF20AO95235 890 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 RPN1P04843 607 aaKnown RBP18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 CSH1P0DML2 217 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 CSH2P0DML3 217 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 MAGEA9P43362 315 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 RPL10AP62906 217 aaKnown RBP18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 TRPC3Q13507 836 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 CFAP221Q4G0U5 840 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 ZNF852Q6ZMS4 543 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 C4orf50Q6ZRC1 276 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 SPATA2LQ8IUW3 424 aaPredicted RBP18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 SLC9A9Q8IVB4 645 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 ARID3BQ8IVW6 561 aaPredicted RBP18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 TMEM174Q8WUU8 243 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 KBTBD7Q8WVZ9 684 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 MMS19Q96T76 1030 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 NELL2Q99435 816 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 SYT15Q9BQS2 421 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 MKNK1Q9BUB5 465 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 BCO2Q9BYV7 579 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 TASP1Q9H6P5 420 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 IL21Q9HBE4 155 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 OBP2AQ9NY56 170 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 GTF3C4Q9UKN8 822 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 CDH9Q9ULB4 789 aa18.42■□□□□ 0.54
SPTAN1-214ENST00000628614 FAM170BA6NMN3 283 aa18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 MAN2B1O00754 1011 aa18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 PDXKO00764 312 aa18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 NCAM2O15394 837 aa18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 WARSP23381 471 aaKnown RBP18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 WEE1P30291 646 aa18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 AP3M2P53677 418 aa18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 TNNC1P63316 161 aa18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 CYP4F8P98187 520 aa18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 MAPRE1Q15691 268 aaKnown RBP18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 CCDC34Q96HJ3 373 aa18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 GZF1Q9H116 711 aaPredicted RBP18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 KCTD10Q9H3F6 313 aa18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 DMAC2Q9NW81 257 aa18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 UXTQ9UBK9 157 aaPredicted RBP18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 NCANO14594 1321 aa18.41■□□□□ 0.54
SPTAN1-214ENST00000628614 CHADO15335 359 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 HCRTO43612 131 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 TACC1O75410 805 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 RHOBTB3O94955 611 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 STAU1O95793 577 aaKnown RBP18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 CST3P01034 146 aaPredicted RBP18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 FAM163BP0C2L3 166 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 GLULP15104 373 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 HMGA1P17096 107 aaKnown RBP18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 CD72P21854 359 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 CYP2F1P24903 491 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 DDX6P26196 483 aaKnown RBP eCLIP18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 ATICP31939 592 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 GPR15P49685 360 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 NLRP12P59046 1061 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 FCHO2Q0JRZ9 810 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 FAM171BQ6P995 826 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 KRBA2Q6ZNG9 492 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 C1orf210Q8IVY1 113 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 CSGALNACT1Q8TDX6 532 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 PARD3BQ8TEW8 1205 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 SYAP1Q96A49 352 aaPredicted RBP18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 RSPRY1Q96DX4 576 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 GOLPH3LQ9H4A5 285 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 MAGED2Q9UNF1 606 aaPredicted RBP18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 COL4A3Q01955 1670 aa18.4■□□□□ 0.54
SPTAN1-214ENST00000628614 MYBPHLA2RUH7 354 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 CALUO43852 315 aaPredicted RBP18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 GFRA3O60609 400 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 PHACTR2O75167 634 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 LRRN2O75325 713 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 NR3C1P04150 777 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 PRR29P0C7W0 189 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 LMO2P25791 158 aa18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 TARSP26639 723 aaKnown RBP18.39■□□□□ 0.53
SPTAN1-214ENST00000628614 MAGEA11P43364 429 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms