RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 CDC23Q9UJX2 597 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 DSEQ9UL01 958 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 TBX21Q9UL17 535 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 STRIP2Q9ULQ0 834 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 SNX12Q9UMY4 172 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 L1RE1Q9UN81 338 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 HYOU1Q9Y4L1 999 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 SAR1BQ9Y6B6 198 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 TRIP12Q14669 1992 aaPredicted RBP8□□□□□ -1.13
PTP4A1-206ENST00000627002 ANK1P16157 1881 aa8□□□□□ -1.13
PTP4A1-206ENST00000627002 CASTOR2A6NHX0 329 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 TMEM189-UBE2V1I3L0A0 370 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 M0QYV0 167 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 O00370 1275 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 DLL1O00548 723 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 GABRDO14764 452 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 BUB1BO60566 1050 aaPredicted RBP7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 B3GAT3O94766 335 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 SLU7O95391 586 aaKnown RBP7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 FTCDO95954 541 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 CFHP08603 1231 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 SETSIPP0DME0 302 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 HOXB3P14651 431 aaPredicted RBP7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 AFF1P51825 1210 aaKnown RBP7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 TUBB4BP68371 445 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 TAP1Q03518 808 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 RNASELQ05823 741 aaKnown RBP7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 DSC1Q08554 894 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 PTP4A2Q12974 167 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 ORC1Q13415 861 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 RPS6KA1Q15418 735 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 LRRC26Q2I0M4 334 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 CLLU1OSQ5K130 101 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 CNKSR3Q6P9H4 555 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 MMS22LQ6ZRQ5 1243 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 PEX26Q7Z412 305 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 ACOT1Q86TX2 421 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 ERICH1Q86X53 443 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 METTL23Q86XA0 190 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 NPAS4Q8IUM7 802 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 CEP112Q8N8E3 955 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 C1orf131Q8NDD1 294 aaKnown RBP7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 MNS1Q8NEH6 495 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 ZNF564Q8TBZ8 553 aaPredicted RBP7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 DPF3Q92784 378 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 SCLYQ96I15 445 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 FAM193BQ96PV7 902 aaPredicted RBP7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 C11orf70Q9BRQ4 267 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 MRPL9Q9BYD2 267 aaKnown RBP7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 OSGEPQ9NPF4 335 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 PARVAQ9NVD7 372 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 WDR35Q9P2L0 1181 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 AMFRQ9UKV5 643 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 STXBP5LQ9Y2K9 1186 aa7.99□□□□□ -1.13
PTP4A1-206ENST00000627002 MIF4GDA9UHW6 222 aaKnown RBP7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 H0YGN5 161 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 M0QZQ0 153 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 CES2O00748 559 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 ENC1O14682 589 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 KIAA0355O15063 1070 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 TRAPPC3O43617 180 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 EFCAB14O75071 495 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 TIMP1P01033 207 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 CYP11A1P05108 521 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 PDGFRBP09619 1106 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 FGFR1P11362 822 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 TYMPP19971 482 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 RRM1P23921 792 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 PCSK1P29120 753 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 SSTR3P32745 418 aaPredicted RBP7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 CYP2C18P33260 490 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 GTF2F1P35269 517 aaKnown RBP eCLIP7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 SLC1A1P43005 524 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 GPD2P43304 727 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 GABRB2P47870 512 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 BCAT1P54687 386 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 GSCP56915 257 aaPredicted RBP7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 SLC8A3P57103 927 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 CKAP4Q07065 602 aaKnown RBP7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 IKBKEQ14164 716 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 ZNF268Q14587 947 aaPredicted RBP7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 GOLGA7BQ2TAP0 167 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 PPP1R26Q5T8A7 1209 aaPredicted RBP7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 WSCD1Q658N2 575 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 PLEKHA7Q6IQ23 1121 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 DNAJC24Q6P3W2 148 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 DEFB128Q7Z7B8 93 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 NT5DC3Q86UY8 548 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 COLGALT2Q8IYK4 626 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 WDTC1Q8N5D0 677 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 B3GALNT2Q8NCR0 500 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 C3orf20Q8ND61 904 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 C3orf58Q8NDZ4 430 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 IPO4Q8TEX9 1081 aaKnown RBP7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 STK32AQ8WU08 396 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 C18orf8Q96DM3 657 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 PBKQ96KB5 322 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 SUSD3Q96L08 255 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 OSBPL9Q96SU4 736 aa7.98□□□□□ -1.13
PTP4A1-206ENST00000627002 HTATIP2Q9BUP3 242 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms