RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 CLDN5O00501 218 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 URODP06132 367 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 CTSAP10619 480 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 PTPN1P18031 435 aaKnown RBP17.67■□□□□ 0.42
CCNA1-203ENST00000625767 LRIT3Q3SXY7 679 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 INTS6LQ5JSJ4 861 aaKnown RBP17.67■□□□□ 0.42
CCNA1-203ENST00000625767 PPP1R26Q5T8A7 1209 aaPredicted RBP17.67■□□□□ 0.42
CCNA1-203ENST00000625767 ZNF280DQ6N043 979 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 TMC7Q7Z402 723 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 DDX1Q92499 740 aaKnown RBP17.67■□□□□ 0.42
CCNA1-203ENST00000625767 PPP1R9BQ96SB3 815 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 CLSTN3Q9BQT9 956 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 ACBD6Q9BR61 282 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 C11orf84Q9BUA3 381 aaPredicted RBP17.67■□□□□ 0.42
CCNA1-203ENST00000625767 MTRRQ9UBK8 725 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 NOCTQ9UK39 431 aaKnown RBP17.67■□□□□ 0.42
CCNA1-203ENST00000625767 CDY1Q9Y6F8 540 aa17.67■□□□□ 0.42
CCNA1-203ENST00000625767 ARHGEF37A1IGU5 675 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 THAP12O43422 761 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 LILRB3O75022 631 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 RB1P06400 928 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 MMEP08473 750 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 FERP16591 822 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 CHRNB2P17787 502 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 HNRNPH3P31942 346 aaKnown RBP17.66■□□□□ 0.42
CCNA1-203ENST00000625767 PTK2Q05397 1052 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 CCDC173Q0VFZ6 552 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 PRPF38BQ5VTL8 546 aaKnown RBP17.66■□□□□ 0.42
CCNA1-203ENST00000625767 ANKS3Q6ZW76 656 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 ZNF571Q7Z3V5 609 aaPredicted RBP17.66■□□□□ 0.42
CCNA1-203ENST00000625767 PALB2Q86YC2 1186 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 TMEM139Q8IV31 216 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 CRYBG2Q8N1P7 616 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 THEM5Q8N1Q8 247 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 SAMD11Q96NU1 681 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 PGLYRP2Q96PD5 576 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 ENTPD7Q9NQZ7 604 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 CDH9Q9ULB4 789 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 C5orf42Q9H799 3197 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 PRUNE2Q8WUY3 3088 aa17.66■□□□□ 0.42
CCNA1-203ENST00000625767 CARNS1A5YM72 827 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 VNN2O95498 520 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 PAEPP09466 180 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 FAM163BP0C2L3 166 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 OR1D2P34982 312 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 KLHL30Q0D2K2 578 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 MEA1Q16626 185 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 SLC39A12Q504Y0 691 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 TDRD12Q587J7 1177 aaKnown RBP17.65■□□□□ 0.42
CCNA1-203ENST00000625767 PAQR9Q6ZVX9 377 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 DNAAF5Q86Y56 855 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 PASD1Q8IV76 773 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 SPATA18Q8TC71 538 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 ZNF606Q8WXB4 792 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 MYLPFQ96A32 169 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 PCED1BQ96HM7 432 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 LRCH3Q96II8 777 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 ZNF830Q96NB3 372 aaPredicted RBP17.65■□□□□ 0.42
CCNA1-203ENST00000625767 SYT11Q9BT88 431 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 ZCWPW1Q9H0M4 648 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 TLR9Q9NR96 1032 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 MRPL17Q9NRX2 175 aaKnown RBP17.65■□□□□ 0.42
CCNA1-203ENST00000625767 TMEM30AQ9NV96 361 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 LZTS1Q9Y250 596 aa17.65■□□□□ 0.42
CCNA1-203ENST00000625767 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.64■□□□□ 0.42
CCNA1-203ENST00000625767 WDR27A2RRH5 827 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 CXCL14O95715 111 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 PCSK1P29120 753 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 ADORA2BP29275 332 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 PRKCIP41743 596 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 PDE6CP51160 858 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 CACNA2D1P54289 1103 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 ROR1Q01973 937 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 FAM171BQ6P995 826 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 FUKQ8N0W3 1084 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 TTC39CQ8N584 583 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 TTC9BQ8N6N2 239 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 SLC2A14Q8TDB8 520 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 SYN2Q92777 582 aaPredicted RBP17.64■□□□□ 0.42
CCNA1-203ENST00000625767 CYFIP2Q96F07 1278 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 TNIP3Q96KP6 325 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 PANX2Q96RD6 677 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 B3GNT5Q9BYG0 378 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 TTYH1Q9H313 450 aaPredicted RBP17.64■□□□□ 0.42
CCNA1-203ENST00000625767 CRISPLD1Q9H336 500 aa17.64■□□□□ 0.42
CCNA1-203ENST00000625767 FAM124BQ9H5Z6 455 aaPredicted RBP17.64■□□□□ 0.42
CCNA1-203ENST00000625767 A0A1W2PPC1 479 aa17.64■□□□□ 0.41
CCNA1-203ENST00000625767 O00370 1275 aa17.64■□□□□ 0.41
CCNA1-203ENST00000625767 TEX28O15482 410 aa17.64■□□□□ 0.41
CCNA1-203ENST00000625767 LPXNO60711 386 aa17.64■□□□□ 0.41
CCNA1-203ENST00000625767 CNPP09543 421 aaKnown RBP17.64■□□□□ 0.41
CCNA1-203ENST00000625767 CPB1P15086 417 aa17.64■□□□□ 0.41
CCNA1-203ENST00000625767 FMO1Q01740 532 aa17.64■□□□□ 0.41
CCNA1-203ENST00000625767 CYP27A1Q02318 531 aa17.64■□□□□ 0.41
CCNA1-203ENST00000625767 MTF1Q14872 753 aa17.64■□□□□ 0.41
CCNA1-203ENST00000625767 SGO2Q562F6 1265 aa17.64■□□□□ 0.41
CCNA1-203ENST00000625767 RNF19BQ6ZMZ0 732 aa17.64■□□□□ 0.41
CCNA1-203ENST00000625767 MYCBPAPQ8TBZ2 947 aa17.64■□□□□ 0.41
CCNA1-203ENST00000625767 PCDHB18PQ96TA0 734 aa17.64■□□□□ 0.41
CCNA1-203ENST00000625767 ZNF518BQ9C0D4 1074 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms