RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 LRRTM3Q86VH5 581 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 CPA6Q8N4T0 437 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 SYT2Q8N9I0 419 aaPredicted RBP15.87■□□□□ 0.13
PNKP-218ENST00000625299 SPPL2BQ8TCT7 592 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 MRPS31Q92665 395 aaKnown RBP15.87■□□□□ 0.13
PNKP-218ENST00000625299 EXOC4Q96A65 974 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 PNMA5Q96PV4 448 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 KIF9Q9HAQ2 790 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 TRPC7Q9HCX4 862 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 ZMYM5Q9UJ78 669 aa15.87■□□□□ 0.13
PNKP-218ENST00000625299 THADAQ6YHU6 1953 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 LNP1A1A4G5 178 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 BCLAF3A2AJT9 711 aaKnown RBP15.86■□□□□ 0.13
PNKP-218ENST00000625299 LAD1O00515 517 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 TOP3BO95985 862 aaKnown RBP15.86■□□□□ 0.13
PNKP-218ENST00000625299 CYP11A1P05108 521 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 DDX6P26196 483 aaKnown RBP eCLIP15.86■□□□□ 0.13
PNKP-218ENST00000625299 GJA4P35212 333 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 PDGFRLQ15198 375 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 FBXO43Q4G163 708 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 SDHAF4Q5VUM1 108 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 SYT13Q7L8C5 426 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 CD302Q8IX05 232 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 C2orf15Q8WU43 125 aaKnown RBP15.86■□□□□ 0.13
PNKP-218ENST00000625299 ACDQ96AP0 544 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 TSPAN18Q96SJ8 248 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 LLPHQ9BRT6 129 aaKnown RBP15.86■□□□□ 0.13
PNKP-218ENST00000625299 TPSD1Q9BZJ3 242 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 TBX20Q9UMR3 447 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 KIAA1549LQ6ZVL6 1849 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 ABCA7Q8IZY2 2146 aa15.86■□□□□ 0.13
PNKP-218ENST00000625299 PIRO00625 290 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 KHNYNO15037 678 aaKnown RBP15.85■□□□□ 0.13
PNKP-218ENST00000625299 F11P03951 625 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 HOXB3P14651 431 aaPredicted RBP15.85■□□□□ 0.13
PNKP-218ENST00000625299 HMGA1P17096 107 aaKnown RBP15.85■□□□□ 0.13
PNKP-218ENST00000625299 PAX3P23760 479 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 PRPHP41219 470 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 TAF6P49848 677 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 HMGN5P82970 282 aaKnown RBP15.85■□□□□ 0.13
PNKP-218ENST00000625299 MTF1Q14872 753 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 UAP1L1Q3KQV9 507 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 WSCD1Q658N2 575 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 DCP1BQ8IZD4 617 aaKnown RBP15.85■□□□□ 0.13
PNKP-218ENST00000625299 TSTD1Q8NFU3 115 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 CD101Q93033 1021 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 PI4K2AQ9BTU6 479 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 ADAM33Q9BZ11 813 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 ECT2Q9H8V3 914 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 TMEM9BQ9NQ34 198 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 DUS2Q9NX74 493 aaKnown RBP15.85■□□□□ 0.13
PNKP-218ENST00000625299 KCND2Q9NZV8 630 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 CPSF3Q9UKF6 684 aaKnown RBP15.85■□□□□ 0.13
PNKP-218ENST00000625299 LIMCH1Q9UPQ0 1083 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 PCDHB5Q9Y5E4 795 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 WNT6Q9Y6F9 365 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 SPEGQ15772 3267 aa15.85■□□□□ 0.13
PNKP-218ENST00000625299 ZZEF1O43149 2961 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 ZFYVE26Q68DK2 2539 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 A0A0B4J269 797 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 ANO9A1A5B4 782 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 PATE3B3GLJ2 98 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 PRPF40AO75400 957 aaKnown RBP15.84■□□□□ 0.13
PNKP-218ENST00000625299 IFNAR2P48551 515 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 ACOT2P49753 483 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 SEC13P55735 322 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 SMARCB1Q12824 385 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 DHX8Q14562 1220 aaKnown RBP15.84■□□□□ 0.13
PNKP-218ENST00000625299 KIAA1211LQ6NV74 962 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 CYP2U1Q7Z449 544 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 MON1AQ86VX9 555 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 TTC30AQ86WT1 665 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 MYCT1Q8N699 235 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 EZH1Q92800 747 aaPredicted RBP15.84■□□□□ 0.13
PNKP-218ENST00000625299 REEP2Q9BRK0 252 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 ZHX3Q9H4I2 956 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 TMLHEQ9NVH6 421 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 EBF1Q9UH73 591 aa15.84■□□□□ 0.13
PNKP-218ENST00000625299 CIZ1Q9ULV3 898 aaPredicted RBP15.84■□□□□ 0.13
PNKP-218ENST00000625299 VWA3AA6NCI4 1184 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 FAM13AO94988 1023 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 PIGRP01833 764 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 CKMP06732 381 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 ADRB2P07550 413 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 CSH1P0DML2 217 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 CSH2P0DML3 217 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 TSPY1Q01534 308 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 USP39Q53GS9 565 aaKnown RBP15.83■□□□□ 0.12
PNKP-218ENST00000625299 ARSHQ5FYA8 562 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 HYIQ5T013 277 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 PMS2CLQ68D20 193 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 ANO7Q6IWH7 933 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 SLC39A4Q6P5W5 647 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 GPBP1Q86WP2 473 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 KDF1Q8NAX2 398 aaPredicted RBP15.83■□□□□ 0.12
PNKP-218ENST00000625299 OSCP1Q8WVF1 389 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 ATP2A3Q93084 1043 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.83■□□□□ 0.12
PNKP-218ENST00000625299 DPP3Q9NY33 737 aa15.83■□□□□ 0.12
PNKP-218ENST00000625299 DERAQ9Y315 318 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms