RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 CBFA2T2O43439 604 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 GALR2O43603 387 aaPredicted RBP13.56□□□□□ -0.24
PNKP-217ENST00000625216 FGFR1OPO95684 399 aaKnown RBP13.56□□□□□ -0.24
PNKP-217ENST00000625216 OR4Q2P0C623 313 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 TUFMP49411 452 aaKnown RBP13.56□□□□□ -0.24
PNKP-217ENST00000625216 CASP4P49662 377 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 GPC5P78333 572 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 RBP5P82980 135 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 PFKPQ01813 784 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 TCF15Q12870 199 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 ADAM9Q13443 819 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 SLC5A9Q2M3M2 681 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 PHLDB3Q6NSJ2 640 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.56□□□□□ -0.24
PNKP-217ENST00000625216 FILIP1Q7Z7B0 1213 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 TMEM105Q8N8V8 129 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 C1orf127Q8N9H9 656 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 ZSWIM2Q8NEG5 633 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 SPATA18Q8TC71 538 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 GPR152Q8TDT2 470 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 C2orf15Q8WU43 125 aaKnown RBP13.56□□□□□ -0.24
PNKP-217ENST00000625216 MCRS1Q96EZ8 462 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 PGLYRP2Q96PD5 576 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 RPP25Q9BUL9 199 aaKnown RBP13.56□□□□□ -0.24
PNKP-217ENST00000625216 ZCWPW1Q9H0M4 648 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 VPS16Q9H269 839 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 PDE11AQ9HCR9 933 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 ASAH2Q9NR71 780 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 AGAP1Q9UPQ3 857 aa13.56□□□□□ -0.24
PNKP-217ENST00000625216 WDFY4Q6ZS81 3184 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 MTMR11A4FU01 709 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 KRBA1A5PL33 1030 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 LRRC10BA6NIK2 292 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 STK25O00506 426 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 SLC16A3O15427 465 aaKnown RBP13.55□□□□□ -0.24
PNKP-217ENST00000625216 TEX33O43247 280 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 HUS1O60921 280 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 AKAP3O75969 853 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 VNN2O95498 520 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 FGF19O95750 216 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 ITGB3P05106 788 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 TMEM191BP0C7N4 346 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 CEBPBP17676 345 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 POLR2BP30876 1174 aaKnown RBP13.55□□□□□ -0.24
PNKP-217ENST00000625216 MTIF2P46199 727 aaKnown RBP13.55□□□□□ -0.24
PNKP-217ENST00000625216 CYP2J2P51589 502 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 MARSP56192 900 aaKnown RBP13.55□□□□□ -0.24
PNKP-217ENST00000625216 WNT7BP56706 349 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 DUOXA2Q1HG44 320 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 CCDC40Q4G0X9 1142 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 MIIPQ5JXC2 388 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 WSCD1Q658N2 575 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 CWF19L1Q69YN2 538 aaKnown RBP13.55□□□□□ -0.24
PNKP-217ENST00000625216 ITIH5Q86UX2 942 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 CREBRFQ8IUR6 639 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 SLC9A9Q8IVB4 645 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 DCP1BQ8IZD4 617 aaKnown RBP13.55□□□□□ -0.24
PNKP-217ENST00000625216 ATAD1Q8NBU5 361 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 ANKRD20A12PQ8NF67 263 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 GOLGA5Q8TBA6 731 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 SPPL2BQ8TCT7 592 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 ING5Q8WYH8 240 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 ELSPBP1Q96BH3 223 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 ANKRD36BP1Q96IX9 119 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 TUBGCP2Q9BSJ2 902 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 RTN4Q9NQC3 1192 aaKnown RBP13.55□□□□□ -0.24
PNKP-217ENST00000625216 GDAP2Q9NXN4 497 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 HSPBP1Q9NZL4 362 aa13.55□□□□□ -0.24
PNKP-217ENST00000625216 LGALS16A8MUM7 142 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 TULP1O00294 542 aaPredicted RBP13.54□□□□□ -0.24
PNKP-217ENST00000625216 TNNC2P02585 160 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 RFX1P22670 979 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 RPL13P26373 211 aaKnown RBP13.54□□□□□ -0.24
PNKP-217ENST00000625216 PBX1P40424 430 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 CCR2P41597 374 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 PRKCQQ04759 706 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 MYO1EQ12965 1108 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 NR1I3Q14994 352 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 MAN2A1Q16706 1144 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 SLC39A12Q504Y0 691 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 CEP135Q66GS9 1140 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 DPH6Q7L8W6 267 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 CBWD2Q8IUF1 395 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 VSTM4Q8IW00 320 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 TRIM59Q8IWR1 403 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 HS6ST3Q8IZP7 471 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 TMEM86AQ8N2M4 240 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 XXYLT1Q8NBI6 393 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 SPC24Q8NBT2 197 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 OR10T2Q8NGX3 314 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 CXorf38Q8TB03 319 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 PSMG2Q969U7 264 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 TCEAL4Q96EI5 215 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 CRISPLD1Q9H336 500 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 ZFP14Q9HCL3 533 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 ARHGEF3Q9NR81 526 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 CA14Q9ULX7 337 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 SLC27A5Q9Y2P5 690 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 DOCK8Q8NF50 2099 aa13.54□□□□□ -0.24
PNKP-217ENST00000625216 PDCD11Q14690 1871 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms