RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 CPA6Q8N4T0 437 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 OR10H5Q8NGA6 315 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 MYEOVQ96EZ4 313 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 CAPNS2Q96L46 248 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 DCLRE1CQ96SD1 692 aaKnown RBP4.01□□□□□ -1.77
CDKL5-208ENST00000624953 NUP88Q99567 741 aaPredicted RBP4.01□□□□□ -1.77
CDKL5-208ENST00000624953 TAOK3Q9H2K8 898 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.01□□□□□ -1.77
CDKL5-208ENST00000624953 AJAP1Q9UKB5 411 aaPredicted RBP4.01□□□□□ -1.77
CDKL5-208ENST00000624953 FZD1Q9UP38 647 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 PCDHB1Q9Y5F3 818 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 CEP290O15078 2479 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 UNC80Q8N2C7 3258 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 A0A0C4DFX4 3053 aa4.01□□□□□ -1.77
CDKL5-208ENST00000624953 EYSQ5T1H1 3165 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 MYH3P11055 1940 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 PRR5-ARHGAP8B1AHC4 643 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 NT5C1B-RDH14C9J2C7 533 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 H0YIN7 160 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 CYR61O00622 381 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 FZD7O75084 574 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 GPR32O75388 356 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 GCSHP23434 173 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 MGAT1P26572 445 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 APOBEC3AP31941 199 aaPredicted RBP4□□□□□ -1.77
CDKL5-208ENST00000624953 EPHX2P34913 555 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 BMPR1AP36894 532 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 MTHFSP49914 203 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 CTXN1P60606 82 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 TLE1Q04724 770 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 CNGB1Q14028 1251 aaPredicted RBP4□□□□□ -1.77
CDKL5-208ENST00000624953 NOMO1Q15155 1222 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 PTPN21Q16825 1174 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 DLK2Q6UY11 383 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 ULK2Q8IYT8 1036 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 ZNF622Q969S3 477 aaKnown RBP eCLIP4□□□□□ -1.77
CDKL5-208ENST00000624953 ADAM2Q99965 735 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 MRIQ9BWK5 157 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 ZNF768Q9H5H4 540 aaKnown RBP4□□□□□ -1.77
CDKL5-208ENST00000624953 MANSC1Q9H8J5 431 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 ALG13Q9NP73 1137 aaKnown RBP4□□□□□ -1.77
CDKL5-208ENST00000624953 DDX21Q9NR30 783 aaKnown RBP eCLIP4□□□□□ -1.77
CDKL5-208ENST00000624953 FBXO34Q9NWN3 711 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 MOCS1Q9NZB8 636 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 CALCOCO1Q9P1Z2 691 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 ACTL7AQ9Y615 435 aa4□□□□□ -1.77
CDKL5-208ENST00000624953 LAMA3Q16787 3333 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 CCDC78A2IDD5 438 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 CCDC154A6NI56 674 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 NPIPB8E9PQR5 432 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 ZNF185O15231 689 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 RNMTO43148 476 aaKnown RBP3.99□□□□□ -1.77
CDKL5-208ENST00000624953 TEX33O43247 280 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 CAMTA2O94983 1202 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 HSP90AB1P08238 724 aaKnown RBP3.99□□□□□ -1.77
CDKL5-208ENST00000624953 ELANEP08246 267 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 HSP90B1P14625 803 aaKnown RBP3.99□□□□□ -1.77
CDKL5-208ENST00000624953 EPS15P42566 896 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 TNNT2P45379 298 aaPredicted RBP3.99□□□□□ -1.77
CDKL5-208ENST00000624953 PIP4K2AP48426 406 aaPredicted RBP3.99□□□□□ -1.77
CDKL5-208ENST00000624953 SOX10P56693 466 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 MAP2K1Q02750 393 aaPredicted RBP3.99□□□□□ -1.77
CDKL5-208ENST00000624953 LSM12Q3MHD2 195 aaKnown RBP3.99□□□□□ -1.77
CDKL5-208ENST00000624953 PDCD4Q53EL6 469 aaKnown RBP3.99□□□□□ -1.77
CDKL5-208ENST00000624953 RRP12Q5JTH9 1297 aaKnown RBP3.99□□□□□ -1.77
CDKL5-208ENST00000624953 GDF7Q7Z4P5 450 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 LDLRAD3Q86YD5 345 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 Q8NA96 180 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 ZFP28Q8NHY6 868 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 ZNF483Q8TF39 744 aaPredicted RBP3.99□□□□□ -1.77
CDKL5-208ENST00000624953 SLC25A43Q8WUT9 341 aaPredicted RBP3.99□□□□□ -1.77
CDKL5-208ENST00000624953 TFAP2CQ92754 450 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 DPF2Q92785 391 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 HDAC10Q969S8 669 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 PLEKHG4BQ96PX9 1271 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 MYOCQ99972 504 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 MRI1Q9BV20 369 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 BRIP1Q9BX63 1249 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 TEX101Q9BY14 249 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 RHOBTB2Q9BYZ6 727 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 KLHL11Q9NVR0 708 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 HACL1Q9UJ83 578 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 CFAP20Q9Y6A4 193 aaKnown RBP3.99□□□□□ -1.77
CDKL5-208ENST00000624953 ABCC12Q96J65 1359 aa3.99□□□□□ -1.77
CDKL5-208ENST00000624953 MYBBP1AQ9BQG0 1328 aaKnown RBP3.98□□□□□ -1.77
CDKL5-208ENST00000624953 TRIOBPQ9H2D6 2365 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 RIC1Q4ADV7 1423 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 GRID2IPA4D2P6 1211 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 KCNQ3O43525 872 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 PRSS23O95084 383 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 ZNF202O95125 648 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 CFIP05156 583 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 ITGB1P05556 798 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 POU2F2P09086 479 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 DDCP20711 480 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 PTPN7P35236 360 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 NHLH2Q02577 135 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 COL10A1Q03692 680 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 SLFN5Q08AF3 891 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 TCF15Q12870 199 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms