RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 WDR72Q3MJ13 1102 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 MGAT5BQ3V5L5 792 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 FOXR2Q6PJQ5 311 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 VSTM1Q6UX27 236 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 DEPDC1BQ8WUY9 529 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 DNASE1L2Q92874 299 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 TCEAL4Q96EI5 215 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 TRMT2BQ96GJ1 504 aaKnown RBP13.32□□□□□ -0.28
LINC00963-217ENST00000624009 FAXDC2Q96IV6 333 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 SHDQ96IW2 340 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 MYRFLQ96LU7 910 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 SEPT5Q99719 369 aaPredicted RBP13.32□□□□□ -0.28
LINC00963-217ENST00000624009 MFSD1Q9H3U5 465 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 FAM124BQ9H5Z6 455 aaPredicted RBP13.32□□□□□ -0.28
LINC00963-217ENST00000624009 OBP2AQ9NY56 170 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 UXTQ9UBK9 157 aaPredicted RBP13.32□□□□□ -0.28
LINC00963-217ENST00000624009 SLC27A5Q9Y2P5 690 aa13.32□□□□□ -0.28
LINC00963-217ENST00000624009 EP300Q09472 2414 aaPredicted RBP13.32□□□□□ -0.28
LINC00963-217ENST00000624009 GVINP1Q7Z2Y8 2422 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 NARSO43776 548 aaKnown RBP13.31□□□□□ -0.28
LINC00963-217ENST00000624009 MYL4P12829 197 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 P4HA1P13674 534 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 AOC1P19801 751 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 FCARP24071 287 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 DDX6P26196 483 aaKnown RBP eCLIP13.31□□□□□ -0.28
LINC00963-217ENST00000624009 GTF2H1P32780 548 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 PLA2G5P39877 138 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 MLLT6P55198 1093 aaPredicted RBP13.31□□□□□ -0.28
LINC00963-217ENST00000624009 PRKCQQ04759 706 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 ADAM9Q13443 819 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 PNOCQ13519 176 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 NCOA4Q13772 614 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 SGSM1Q2NKQ1 1148 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 ARHGAP15Q53QZ3 475 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 FAM78AQ5JUQ0 283 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 TDRD10Q5VZ19 366 aaKnown RBP13.31□□□□□ -0.28
LINC00963-217ENST00000624009 SCARA3Q6AZY7 606 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 GAREM2Q75VX8 874 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 OSTM1Q86WC4 334 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 HS6ST3Q8IZP7 471 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 TTC9BQ8N6N2 239 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 SHKBP1Q8TBC3 707 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 PLEKHO2Q8TD55 490 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 ING5Q8WYH8 240 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 SMARCE1Q969G3 411 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 MCRS1Q96EZ8 462 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 MMS19Q96T76 1030 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 SYT15Q9BQS2 421 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 SMOC2Q9H3U7 446 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 ARHGEF3Q9NR81 526 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 ABI2Q9NYB9 513 aaPredicted RBP13.31□□□□□ -0.28
LINC00963-217ENST00000624009 CHMP5Q9NZZ3 219 aa13.31□□□□□ -0.28
LINC00963-217ENST00000624009 FANCMQ8IYD8 2048 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 SLC16A3O15427 465 aaKnown RBP13.3□□□□□ -0.28
LINC00963-217ENST00000624009 KINO60870 393 aaKnown RBP13.3□□□□□ -0.28
LINC00963-217ENST00000624009 PHACTR2O75167 634 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 AKAP3O75969 853 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 KRT13P13646 458 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 NPR3P17342 541 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 PSMC3P17980 439 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 GNL1P36915 607 aaPredicted RBP13.3□□□□□ -0.28
LINC00963-217ENST00000624009 CASP4P49662 377 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 VAMP7P51809 220 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 STARD6P59095 220 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 MYL6P60660 151 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 LRRC63Q05C16 580 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 BIRC3Q13489 604 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 ZNF699Q32M78 642 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 ZNF667Q5HYK9 610 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 CEP135Q66GS9 1140 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 SV2AQ7L0J3 742 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 SPATA2LQ8IUW3 424 aaPredicted RBP13.3□□□□□ -0.28
LINC00963-217ENST00000624009 ZC3H3Q8IXZ2 948 aaKnown RBP13.3□□□□□ -0.28
LINC00963-217ENST00000624009 SIX5Q8N196 739 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 MYCBPAPQ8TBZ2 947 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 GPR152Q8TDT2 470 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 FAM84AQ96KN4 292 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 SPATA17Q96L03 361 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 GCNAQ96QF7 691 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 RPP25Q9BUL9 199 aaKnown RBP13.3□□□□□ -0.28
LINC00963-217ENST00000624009 DDX23Q9BUQ8 820 aaKnown RBP13.3□□□□□ -0.28
LINC00963-217ENST00000624009 OSBPL6Q9BZF3 934 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 SNX25Q9H3E2 840 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 IL21Q9HBE4 155 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 TMLHEQ9NVH6 421 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 EHD2Q9NZN4 543 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 GTF3C4Q9UKN8 822 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 PCDHA5Q9Y5H7 936 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 TICRRQ7Z2Z1 1910 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 COL4A2P08572 1712 aa13.3□□□□□ -0.28
LINC00963-217ENST00000624009 HELZP42694 1942 aaKnown RBP13.29□□□□□ -0.28
LINC00963-217ENST00000624009 A0A1W2PRU2 124 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 KRBA1A5PL33 1030 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 TULP1O00294 542 aaPredicted RBP13.29□□□□□ -0.28
LINC00963-217ENST00000624009 TRIM66O15016 1216 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 CETN3O15182 167 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 STX10O60499 249 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 NOL4O94818 638 aa13.29□□□□□ -0.28
LINC00963-217ENST00000624009 ASS1P00966 412 aaKnown RBP13.29□□□□□ -0.28
LINC00963-217ENST00000624009 PDGFBP01127 241 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms