RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 GLRA4Q5JXX5 417 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 RASIP1Q5U651 963 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 SIAH1Q8IUQ4 282 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 RIBC1Q8N443 379 aaPredicted RBP13.45□□□□□ -0.26
MSH6-215ENST00000622629 MCUQ8NE86 351 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 TTC1Q99614 292 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 AVENQ9NQS1 362 aaPredicted RBP13.45□□□□□ -0.26
MSH6-215ENST00000622629 PNMA3Q9UL41 463 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 MYH13Q9UKX3 1938 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 CCDC78A2IDD5 438 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 SPECC1L-ADORA2AF8WAN1 911 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 CYP1A2P05177 515 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 ETS1P14921 441 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 TYK2P29597 1187 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 HOXD13P35453 343 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 GCLCP48506 637 aaPredicted RBP13.45□□□□□ -0.26
MSH6-215ENST00000622629 PRPSAP1Q14558 356 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 ITIH4Q14624 930 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 RRP1BQ14684 758 aaKnown RBP13.45□□□□□ -0.26
MSH6-215ENST00000622629 ERMARDQ5T6L9 678 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 KCNV1Q6PIU1 500 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 LONP2Q86WA8 852 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 CPNE8Q86YQ8 564 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 FBXO16Q8IX29 292 aaPredicted RBP13.45□□□□□ -0.26
MSH6-215ENST00000622629 OR5B17Q8NGF7 314 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 FAM111AQ96PZ2 611 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 PCMTD2Q9NV79 361 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 PRMT7Q9NVM4 692 aaPredicted RBP13.45□□□□□ -0.26
MSH6-215ENST00000622629 HAO1Q9UJM8 370 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 RIPK3Q9Y572 518 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 E2F8A0AVK6 867 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 GPD1P21695 349 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 DRG2P55039 364 aaKnown RBP13.45□□□□□ -0.26
MSH6-215ENST00000622629 RPL7AP62424 266 aaKnown RBP13.45□□□□□ -0.26
MSH6-215ENST00000622629 CDKL3Q8IVW4 592 aaPredicted RBP13.45□□□□□ -0.26
MSH6-215ENST00000622629 AFAP1L2Q8N4X5 818 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 ASAP3Q8TDY4 903 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 APOBEC2Q9Y235 224 aaKnown RBP13.45□□□□□ -0.26
MSH6-215ENST00000622629 SSX2IPQ9Y2D8 614 aa13.45□□□□□ -0.26
MSH6-215ENST00000622629 HBP1O60381 514 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 GPC4O75487 556 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 HSPA4LO95757 839 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 CPA2P48052 419 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 LAMTOR4Q0VGL1 99 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 SEPT6Q14141 434 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 TDRD10Q5VZ19 366 aaKnown RBP13.44□□□□□ -0.26
MSH6-215ENST00000622629 DAW1Q8N136 415 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 SAMD3Q8N6K7 520 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 KDM4CQ9H3R0 1056 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 CYP4F11Q9HBI6 524 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 ABCF3Q9NUQ8 709 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 ERAP1Q9NZ08 941 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 STOML1Q9UBI4 398 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 TRIM49D1C9J1S8 452 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 PLCB4Q15147 1175 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 MROH9Q5TGP6 573 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 RPAINQ86UA6 219 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 CCDC124Q96CT7 223 aaKnown RBP13.44□□□□□ -0.26
MSH6-215ENST00000622629 SPC25Q9HBM1 224 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 INPP5FQ9Y2H2 1132 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 ADCY3O60266 1144 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 ZWINTO95229 277 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 NQO1P15559 274 aaKnown RBP13.44□□□□□ -0.26
MSH6-215ENST00000622629 MCL1Q07820 350 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 MPZL3Q6UWV2 235 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 CCT6BQ92526 530 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 GCOM2Q9BZD3 368 aaPredicted RBP13.44□□□□□ -0.26
MSH6-215ENST00000622629 DMAC2Q9NW81 257 aa13.44□□□□□ -0.26
MSH6-215ENST00000622629 GIPC1O14908 333 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 ATP9BO43861 1147 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 SHOX2O60902 331 aaPredicted RBP13.43□□□□□ -0.26
MSH6-215ENST00000622629 SMIM24O75264 130 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 ENO1P06733 434 aaKnown RBP13.43□□□□□ -0.26
MSH6-215ENST00000622629 GSTA1P08263 222 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 GSTA2P09210 222 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 HSD17B4P51659 736 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 VCPP55072 806 aaKnown RBP13.43□□□□□ -0.26
MSH6-215ENST00000622629 PKN2Q16513 984 aaKnown RBP13.43□□□□□ -0.26
MSH6-215ENST00000622629 ZACNQ401N2 412 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 C1orf146Q5VVC0 180 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 WDR49Q8IV35 697 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 ALKBH8Q96BT7 664 aaKnown RBP13.43□□□□□ -0.26
MSH6-215ENST00000622629 P2RX7Q99572 595 aaKnown RBP13.43□□□□□ -0.26
MSH6-215ENST00000622629 NCAPGQ9BPX3 1015 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 POLIQ9UNA4 740 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.43□□□□□ -0.26
MSH6-215ENST00000622629 LAMA4Q16363 1823 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 LOC102724159A0A0B4J2E5 919 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 ASB14A6NK59 587 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 TULP2O00295 520 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 ASAP2O43150 1006 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 MAP3K7O43318 606 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 GLRA2P23416 452 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 MAMLD1Q13495 774 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 MORF4L2Q15014 288 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 PWP2Q15269 919 aaKnown RBP13.43□□□□□ -0.26
MSH6-215ENST00000622629 RPS6KA2Q15349 733 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 TTC27Q6P3X3 843 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 ACOT1Q86TX2 421 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms