RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 MINDY3Q9H8M7 445 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 ELP3Q9H9T3 547 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 IFT122Q9HBG6 1241 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 DNAJC17Q9NVM6 304 aaKnown RBP9.94□□□□□ -0.82
PDPN-212ENST00000621990 NAALADL1Q9UQQ1 740 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 ADM5C9JUS6 153 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 SNX3O60493 162 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 LRCH4O75427 683 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 ITGBL1O95965 494 aaPredicted RBP9.94□□□□□ -0.82
PDPN-212ENST00000621990 GSTA1P08263 222 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 CXCL8P10145 99 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 GCAP28676 217 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 RFC1P35251 1148 aaPredicted RBP9.94□□□□□ -0.82
PDPN-212ENST00000621990 GABRB2P47870 512 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 ARSEP51690 589 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 SLC18A1P54219 525 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 LACTBP83111 547 aaPredicted RBP9.94□□□□□ -0.82
PDPN-212ENST00000621990 AMHR2Q16671 573 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 CYP4A22Q5TCH4 519 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 KAZNQ674X7 775 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 EFCAB12Q6NXP0 572 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 FBXO16Q8IX29 292 aaPredicted RBP9.94□□□□□ -0.82
PDPN-212ENST00000621990 THNSL1Q8IYQ7 743 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 CEP120Q8N960 986 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 C1orf127Q8N9H9 656 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 CFAP57Q96MR6 1250 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 MMP19Q99542 508 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 MROH8Q9H579 483 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 PRMT7Q9NVM4 692 aaPredicted RBP9.94□□□□□ -0.82
PDPN-212ENST00000621990 SAMD15Q9P1V8 674 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 WDR35Q9P2L0 1181 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 POLIQ9UNA4 740 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 SLC12A4Q9UP95 1085 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 ZNF148Q9UQR1 794 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 FARP1Q9Y4F1 1045 aaPredicted RBP9.94□□□□□ -0.82
PDPN-212ENST00000621990 PLXNA1Q9UIW2 1896 aa9.94□□□□□ -0.82
PDPN-212ENST00000621990 INO80B-WBP1J3KQ70 363 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 DNAJC8O75937 253 aaPredicted RBP9.93□□□□□ -0.82
PDPN-212ENST00000621990 GJB1P08034 283 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 KRT7P08729 469 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 MCF2P10911 925 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 KRT3P12035 628 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 BRAFP15056 766 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 NR1H3Q13133 447 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 PPIL2Q13356 520 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 XRCC4Q13426 336 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 KCTD2Q14681 263 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 Q3C1V9 767 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 SCARA5Q6ZMJ2 495 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 BBS12Q6ZW61 710 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 XYLT1Q86Y38 959 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 SULF1Q8IWU6 871 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 ANKRD13AQ8IZ07 590 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 TRAPPC12Q8WVT3 735 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 DCPSQ96C86 337 aaKnown RBP9.93□□□□□ -0.82
PDPN-212ENST00000621990 C9orf72Q96LT7 481 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 NLRP4Q96MN2 994 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 INO80BQ9C086 356 aaPredicted RBP9.93□□□□□ -0.82
PDPN-212ENST00000621990 SDCBP2Q9H190 292 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 RPF1Q9H9Y2 349 aaKnown RBP9.93□□□□□ -0.82
PDPN-212ENST00000621990 PPCSQ9HAB8 311 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 EVPLQ92817 2033 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 LRRD1A4D1F6 860 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 GPR25O00155 361 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 ALOX15BO15296 676 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 NFICP08651 508 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 VIMP08670 466 aaKnown RBP9.93□□□□□ -0.82
PDPN-212ENST00000621990 ZSCAN5DPP0CG00 497 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 PECAM1P16284 738 aaPredicted RBP9.93□□□□□ -0.82
PDPN-212ENST00000621990 ATICP31939 592 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 IFNAR2P48551 515 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 MKRN3Q13064 507 aaKnown RBP9.93□□□□□ -0.82
PDPN-212ENST00000621990 GPS1Q13098 491 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 ZNF268Q14587 947 aaPredicted RBP9.93□□□□□ -0.82
PDPN-212ENST00000621990 ACAP1Q15027 740 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 ZNF667Q5HYK9 610 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 ZNF484Q5JVG2 852 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 TMEM192Q8IY95 271 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 KIAA0319LQ8IZA0 1049 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 SLC4A11Q8NBS3 891 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 PRCCQ92733 491 aaPredicted RBP9.93□□□□□ -0.82
PDPN-212ENST00000621990 CLMNQ96JQ2 1002 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 CPXM1Q96SM3 734 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 CYP3A43Q9HB55 503 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 UBN1Q9NPG3 1134 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 ERAP1Q9NZ08 941 aa9.93□□□□□ -0.82
PDPN-212ENST00000621990 H0YHG0 523 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 CILPO75339 1184 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 STAU1O95793 577 aaKnown RBP9.92□□□□□ -0.82
PDPN-212ENST00000621990 TXNP10599 105 aaKnown RBP9.92□□□□□ -0.82
PDPN-212ENST00000621990 PSMA2P25787 234 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 IL1R2P27930 398 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 CLCN3P51790 818 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 PCGF5Q86SE9 256 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 TTC13Q8NBP0 860 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 SHCBP1Q8NEM2 672 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 CMASQ8NFW8 434 aaPredicted RBP9.92□□□□□ -0.82
PDPN-212ENST00000621990 JOSD2Q8TAC2 188 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 COPS5Q92905 334 aa9.92□□□□□ -0.82
PDPN-212ENST00000621990 MCRS1Q96EZ8 462 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms